RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 OR5B3Q8NH48 314 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 FCAMRQ8WWV6 532 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 MARC2Q969Z3 335 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 ZNF486Q96H40 463 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 TMEM56Q96MV1 263 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 RCHY1Q96PM5 261 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 THAP7Q9BT49 309 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 TUBA4BQ9H853 241 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 NDUFA4L2Q9NRX3 87 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 SLC2A8Q9NY64 477 aa11.03□□□□□ -0.64
NIF3L1-205ENST00000409588 TEX50A0A1B0GTY4 177 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 CGB1A6NKQ9 187 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 GABARAPO95166 117 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 KRASP01116 189 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 IFNA6P05013 189 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 FOLR2P14207 255 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 RPA2P15927 270 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 CBLN1P23435 193 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 CTF1Q16619 201 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 CLEC19AQ6UXS0 136 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 DYNLRB2Q8TF09 96 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 RABL2AQ9UBK7 228 aaPredicted RBP11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 RABL2BQ9UNT1 228 aa11.02□□□□□ -0.65
NIF3L1-205ENST00000409588 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 C2orf70A6NJV1 201 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 A8MWP6 167 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 FAM25AB3EWG3 89 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 FAM25CB3EWG5 89 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 FAM25GB3EWG6 89 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 PPP5D1E7EU14 171 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 HPGDSO60760 199 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 ANKRD55Q3KP44 614 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 ZNF585BQ52M93 769 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 GPR107Q5VW38 600 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 SPSB3Q6PJ21 355 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 HAPLN4Q86UW8 402 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 SNX29P2Q8IUI4 249 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 ARRDC1Q8N5I2 433 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 ZC4H2Q9NQZ6 224 aa11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-205ENST00000409588 ZNF320A2RRD8 509 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 ATG12O94817 140 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 OR13C7P0DN81 318 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 SSBP1Q04837 148 aaKnown RBP11□□□□□ -0.65
NIF3L1-205ENST00000409588 CD300EQ496F6 205 aaPredicted RBP11□□□□□ -0.65
NIF3L1-205ENST00000409588 PLET1Q6UQ28 207 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 ZNF502Q8TBZ5 544 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 SPATA25Q9BR10 227 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 MRPS26Q9BYN8 205 aaKnown RBP11□□□□□ -0.65
NIF3L1-205ENST00000409588 MRPL27Q9P0M9 148 aaKnown RBP11□□□□□ -0.65
NIF3L1-205ENST00000409588 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 OR51B2Q9Y5P1 312 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 STAB2Q8WWQ8 2551 aa11□□□□□ -0.65
NIF3L1-205ENST00000409588 TRAV25A0A0B4J276 109 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 ZNF785A8K8V0 405 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 B3GALNT1O75752 331 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 REG1AP05451 166 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 MYOD1P15172 320 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 G6PCP35575 357 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 RND3P61587 244 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 MRPS10P82664 201 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 RNASE10Q5GAN6 216 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 SLC25A24Q6NUK1 477 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 ADAMTSL5Q6ZMM2 481 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 GPR141Q7Z602 305 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 TBC1D26Q86UD7 250 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 BSCL2Q96G97 398 aaPredicted RBP10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 CITED4Q96RK1 184 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 FXYD6Q9H0Q3 95 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 TMEM14BQ9NUH8 114 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 MTFP1Q9UDX5 166 aa10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 F11RQ9Y624 299 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-205ENST00000409588 C8orf88P0DMB2 117 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 CD81P60033 236 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 WT1-ASQ06250 92 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 ZNF57Q68EA5 555 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 SLC16A13Q7RTY0 426 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 OR10W1Q8NGF6 305 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 OR1P1Q8NH06 330 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 OR4A16Q8NH70 328 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 MUC7Q8TAX7 377 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 ZFAND1Q8TCF1 268 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 BCL7BQ9BQE9 202 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 NEURL2Q9BR09 285 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 EXTL2Q9UBQ6 330 aa10.98□□□□□ -0.65
NIF3L1-205ENST00000409588 IZUMO1RA6ND01 250 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 C15orf61A6NNL5 157 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 IGHV3-23P01764 117 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 HLA-AP01891 365 aaKnown RBP10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 SMIM18P0DKX4 95 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 ALDH3B2P48448 385 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 TAS2R19P59542 299 aa10.97□□□□□ -0.65
NIF3L1-205ENST00000409588 HAGHQ16775 308 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms