RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SSBP3Q9BWW4 388 aaPredicted RBP5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 HINT2Q9BX68 163 aa5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 NPCDR1Q9BY65 106 aa5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 NKX6-2Q9C056 277 aaPredicted RBP5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 UBTD1Q9HAC8 227 aa5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 PLEKHA3Q9HB20 300 aa5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 WDR83OSQ9Y284 106 aa5.09□□□□□ -1.6
GTF3C3-202ENST00000409364 MALRD1Q5VYJ5 2156 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 IGSF10Q6WRI0 2623 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 A0A1W2PN81 502 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 A0A1W2PPR1 153 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 FAM157AC9JC47 383 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 C9JQL5 133 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 LY6HO94772 140 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 PRTN3P24158 256 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 CHRNA7P36544 502 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 ACOT6Q3I5F7 207 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 KHDC3LQ587J8 217 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 RBMS3Q6XE24 437 aaKnown RBP5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 OR11H6Q8NGC7 330 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 ACTR3CQ9C0K3 210 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 NDUFA4L2Q9NRX3 87 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 ONECUT1Q9UBC0 465 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 HIVEP3Q5T1R4 2406 aa5.08□□□□□ -1.6
GTF3C3-202ENST00000409364 KALRNO60229 2985 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 IGHV1-3A0A0C4DH29 117 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 SMCO3A2RU48 225 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 C22orf46C9J442 243 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 PRSS46E5RG02 174 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 C19orf84I3L1E1 186 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 ENSAO43768 121 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 CA2P00918 260 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 HSPB1P04792 205 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 ADCYAP1P18509 176 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 HTR1DP28221 377 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 TAGLN2P37802 199 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 CDKN1AP38936 164 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 CEACAM3P40198 252 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 PPT1P50897 306 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 SUB1P53999 127 aaKnown RBP eCLIP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 ARF6P62330 175 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 DIAPH2-AS1Q14236 149 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 GUCA2BQ16661 112 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 C2orf83Q53S99 150 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 SOHLH1Q5JUK2 328 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 ZNF506Q5JVG8 444 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 FFAR4Q5NUL3 377 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 ATRAIDQ6UW56 229 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 LCN15Q6UWW0 184 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 MOB3BQ86TA1 216 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 MRPL41Q8IXM3 137 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 PNKDQ8N490 385 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 RPP25LQ8N5L8 163 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 KIR3DL3Q8N743 410 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 OR10G4Q8NGN3 311 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 OR10G9Q8NGN4 311 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 OR10G7Q8NGN6 311 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 CLDND2Q8NHS1 167 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 CACNG8Q8WXS5 425 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 RPEQ96AT9 228 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 RCC1LQ96I51 464 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 VSIRQ9H7M9 311 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 KCNIP2Q9NS61 270 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 DPM3Q9P2X0 92 aa5.07□□□□□ -1.6
GTF3C3-202ENST00000409364 CTXND1A0A1B0GTU2 59 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 A0A1B0GV50 99 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 MAP1LC3B2A6NCE7 125 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 LY6LH3BQJ8 138 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OVOL3O00110 214 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 ACTL6BO94805 426 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 IFNA1P01562 189 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 IGLV2-23P01705 113 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 COX7A1P24310 79 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 MAS1LP35410 378 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OPRK1P41145 380 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 ELLP55199 621 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 ZNF726P1Q15940 193 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 C21orf62-AS1Q17RA5 79 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TMEM249Q2WGJ8 235 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 BSXQ3C1V8 233 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TEPPQ6URK8 271 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 MMD2Q8IY49 270 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 Q8N7P7 452 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 CLRN3Q8NCR9 226 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OR4P4Q8NGL7 312 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TMEM170AQ8WVE7 144 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 RARRES2Q99969 163 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 MAP1LC3BQ9GZQ8 125 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 TPSG1Q9NRR2 321 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 LSM4Q9Y4Z0 139 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 KLF2Q9Y5W3 355 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 DSCAML1Q8TD84 2053 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OOSP1A8MZH6 123 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 SLC25A17O43808 307 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 NDUFS6O75380 124 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OPN1MWP04001 364 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OPN1MW2P0DN77 364 aa5.06□□□□□ -1.6
GTF3C3-202ENST00000409364 OPN1MW3P0DN78 364 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms