RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 AREGP15514 252 aa11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 IAH1Q2TAA2 248 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 CXorf66Q5JRM2 361 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 OR5M8Q8NGP6 311 aa11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 PRNDQ9UKY0 176 aa11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-204ENST00000409323 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 DEFA5Q01523 94 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 LCNL1Q6ZST4 164 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 Q8N2B8 174 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.09□□□□□ -0.63
CHRNA1-204ENST00000409323 TEX22C9J3V5 150 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 PRH1P02810 166 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 HKR1P10072 659 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 FOXRED2Q8IWF2 684 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 STPG2Q8N412 459 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 SGMS2Q8NHU3 365 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 PDCD10Q9BUL8 212 aa11.08□□□□□ -0.64
CHRNA1-204ENST00000409323 TRAV41A0A0B4J266 112 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 A0A1B0GU03 582 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 A0A1W2PN81 502 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 AP4M1O00189 453 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 KCNAB3O43448 404 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 MAS1LP35410 378 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 CHRNA7P36544 502 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 RPL15P61313 204 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 GSG1LQ6UXU4 331 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 ZBTB8BQ8NAP8 495 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 C19orf24Q9BVV8 132 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 NDUFA4L2Q9NRX3 87 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 CEBPZOSA8MTT3 80 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 SOX15O60248 233 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 PITX3O75364 302 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 NDUFA7O95182 113 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 OR13C7P0DN81 318 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 IAPPP10997 89 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 HOXA1P49639 335 aaPredicted RBP11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 HSPE1P61604 102 aaKnown RBP11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 IL15RAQ13261 267 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 Q5BKY6 102 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 LAMTOR1Q6IAA8 161 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 KLHDC1Q8N7A1 406 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 OR11H4Q8NGC9 324 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 OR2T35Q8NGX2 323 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 OR4F5Q8NH21 305 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 RBKSQ9H477 322 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 RNF114Q9Y508 228 aa11.07□□□□□ -0.64
CHRNA1-204ENST00000409323 IGLC7A0M8Q6 106 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 NKX2-5P52952 324 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 POLR2GP62487 172 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 PRCDQ00LT1 54 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 TNFRSF9Q07011 255 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 LRRC37A5PQ49AS3 106 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 OR4D5Q8NGN0 318 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 OR5B3Q8NH48 314 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 MS4A10Q96PG2 267 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 C16orf95Q9H693 158 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 ZNF355PQ9NSJ1 428 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 ATRQ13535 2644 aa11.06□□□□□ -0.64
CHRNA1-204ENST00000409323 FBN1P35555 2871 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 HMSDA8MTL9 139 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 SMLR1H3BR10 107 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 IGF1P05019 195 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 FGF2P09038 288 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 S100A10P60903 97 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 CYCSP99999 105 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 NMES1Q9C002 83 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 PLEKHA3Q9HB20 300 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 ZNF257Q9Y2Q1 563 aa11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 LSM5Q9Y4Y9 91 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-204ENST00000409323 PIGBOS1A0A0B4J2F0 54 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 CLPSL1A2RUU4 121 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 PSMB11A5LHX3 300 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 WRBO00258 174 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 SSSCA1O60232 199 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 MBPP02686 304 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 SLC25A6P12236 298 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 NKX2-1P43699 371 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 KRTAP10-3P60369 221 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 SPCS3P61009 180 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 C19orf54Q5BKX5 351 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 TMEM65Q6PI78 240 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 HSPB7Q9UBY9 170 aa11.04□□□□□ -0.64
CHRNA1-204ENST00000409323 H3BP45 60 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms