RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 AMELYQ99218 206 aa5.15□□□□□ -1.58
SCN1A-203ENST00000409050 WDR83OSQ9Y284 106 aa5.15□□□□□ -1.58
SCN1A-203ENST00000409050 FAM181BA6NEQ2 426 aa5.15□□□□□ -1.58
SCN1A-203ENST00000409050 RPL23P62829 140 aaKnown RBP5.15□□□□□ -1.58
SCN1A-203ENST00000409050 SRSF4Q08170 494 aaKnown RBP5.15□□□□□ -1.58
SCN1A-203ENST00000409050 SPATA31B1PQ5VZV4 182 aa5.15□□□□□ -1.58
SCN1A-203ENST00000409050 PRR7Q8TB68 274 aa5.15□□□□□ -1.58
SCN1A-203ENST00000409050 PILRBQ9UKJ0 227 aa5.15□□□□□ -1.58
SCN1A-203ENST00000409050 C12orf77C9JDV5 145 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 TNFSF13O75888 250 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 ZNF362Q5T0B9 420 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-203ENST00000409050 TMEM170BQ5T4T1 132 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 Q6ZS49 121 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 TMEM86BQ8N661 226 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 SIGMAR1Q99720 223 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 RTBDNQ9BSG5 229 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-203ENST00000409050 TCRBV4S1A1TA0A5B7 111 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 A8MWV9 139 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 GREM1O60565 184 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 C1QL1O75973 258 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 CCL8P80075 99 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 SNAI3Q3KNW1 292 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 HCP5Q6MZN7 132 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 CHTOPQ9Y3Y2 248 aaKnown RBP5.15□□□□□ -1.59
SCN1A-203ENST00000409050 FOCADQ5VW36 1801 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 ECM29Q5VYK3 1845 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 STRCP1A6NGW2 1772 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 PRCDQ00LT1 54 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 ICAM4Q14773 271 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 WDR82Q6UXN9 313 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 NUP37Q8NFH4 326 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 ZNF831Q5JPB2 1677 aa5.15□□□□□ -1.59
SCN1A-203ENST00000409050 LOC102723996A0A087X1L8 192 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 A0A1W2PR77 199 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 ITGB1BP1O14713 200 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 IL18BPO95998 194 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 FTH1P19P0C7X4 201 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 PPP1R27Q86WC6 154 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 RPP25Q9BUL9 199 aaKnown RBP5.14□□□□□ -1.59
SCN1A-203ENST00000409050 DERL1Q9BUN8 251 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 NRN1Q9NPD7 142 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 EPDR1Q9UM22 224 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 CENPVL1A0A0U1RR11 272 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 THY1P04216 161 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 ZP1P60852 638 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 DMRTA1Q5VZB9 504 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 LAIR2Q6ISS4 152 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 WFDC3Q8IUB2 231 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 EAF1Q96JC9 268 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-203ENST00000409050 SPSB2Q99619 263 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 TMEM160Q9NX00 188 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 TRAV24A0A0B4J272 114 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 F12P00748 615 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-203ENST00000409050 CBLN1P23435 193 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 CFHR1Q03591 330 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 SPSB3Q6PJ21 355 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 HOXA3O43365 443 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-203ENST00000409050 MYF5P13349 255 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 REG1BP48304 166 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 STPG1Q5TH74 334 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 RFLNBQ8N5W9 214 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 DNAJC30Q96LL9 226 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 NEU1Q99519 415 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 FOXC2Q99958 501 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 SLC25A39Q9BZJ4 359 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-203ENST00000409050 Q9H3A6 140 aa5.14□□□□□ -1.59
SCN1A-203ENST00000409050 EGR4Q05215 589 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 CD69Q07108 199 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 RTN4RQ9BZR6 473 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 SLC25A15Q9Y619 301 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 NBR2O15453 112 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 TRGV3P03979 118 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 MNX1P50219 401 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-203ENST00000409050 GFRA4Q9GZZ7 299 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 TRBV7-9A0A0J9YWB2 115 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 LOC105371267A0A1B0GV96 52 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 MINOS1Q5TGZ0 78 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 HEPN1Q6WQI6 88 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 LINC00469Q8N7U9 141 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 OR13C6PQ8NH95 151 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 SSBP3Q9BWW4 388 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-203ENST00000409050 AURKAIP1Q9NWT8 199 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-203ENST00000409050 HILPDAQ9Y5L2 63 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 MINOS1-NBL1R4GNA1 71 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 FOXI3A8MTJ6 420 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-203ENST00000409050 NKX2-8O15522 239 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 IGKCP01834 107 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 LGALS1P09382 135 aaKnown RBP5.13□□□□□ -1.59
SCN1A-203ENST00000409050 CFPP27918 469 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 ZNF497Q6ZNH5 498 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 SLC22A18ASQ8N1D0 253 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 NPFFR1Q9GZQ6 430 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 NCOR1P1Q9H4R4 102 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 FOXA2Q9Y261 457 aaPredicted RBP5.13□□□□□ -1.59
SCN1A-203ENST00000409050 TRAV8-4A0A0B4J246 113 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 NDUFS8O00217 210 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 IGHV3-13P01766 116 aa5.13□□□□□ -1.59
SCN1A-203ENST00000409050 IGHV3-7P01780 117 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms