RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 RNF2Q99496 336 aa9.54□□□□□ -0.88
TUBA3D-202ENST00000409047 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
TUBA3D-202ENST00000409047 TRAV1-2A0A0B4J238 106 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 K7EIM0 57 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 CASQ2O14958 399 aaPredicted RBP9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 TNFSF12O43508 249 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 IFNA4P05014 189 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 GDPD1Q8N9F7 314 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 Q8NAQ8 132 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 DCSTAMPQ9H295 470 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 CCL28Q9NRJ3 127 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
TUBA3D-202ENST00000409047 IGHV3-21A0A0B4J1V1 117 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 TMEM235A6NFC5 223 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 IGLL5B9A064 214 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 CHEK1O14757 476 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 RBFOX2O43251 390 aaKnown RBP eCLIP9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 SERPINE2P07093 398 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 FGF2P09038 288 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 GIG44P09565 113 aaPredicted RBP9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 PTHLHP12272 177 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 RANBP1P43487 201 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 RCN1Q15293 331 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 SPSB3Q6PJ21 355 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 SPAG16Q8N0X2 631 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 SCARB1Q8WTV0 552 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 ATP6V0BQ99437 205 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 MGLLQ99685 303 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 C20orf24Q9BUV8 137 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 QTRT1Q9BXR0 403 aaKnown RBP9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 HRASLSQ9HDD0 168 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 ACOT13Q9NPJ3 140 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 THYN1Q9P016 225 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 ANXA10Q9UJ72 324 aa9.52□□□□□ -0.89
TUBA3D-202ENST00000409047 METTL21EPA6NDL7 271 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 SULT1C2O00338 296 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 RTL8CO15255 209 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 CTSGP08311 255 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 TAS2R31P59538 309 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 MSMO1Q15800 293 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 OR10C1Q96KK4 312 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 ATG5Q9H1Y0 275 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 SCN3BQ9NY72 215 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
TUBA3D-202ENST00000409047 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 TEX50A0A1B0GTY4 177 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 XRCC3O43542 346 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 OR13C7P0DN81 318 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 ARL6IP1Q15041 203 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 SLC25A24Q6NUK1 477 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 OR13F1Q8NGS4 319 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 SECTM1Q8WVN6 248 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 RHPN1-AS1Q9BWJ2 59 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 COMMD5Q9GZQ3 224 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 HRH4Q9H3N8 390 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 NDUFA4L2Q9NRX3 87 aa9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 F11RQ9Y624 299 aaKnown RBP9.5□□□□□ -0.89
TUBA3D-202ENST00000409047 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 SMIM30A4D0T7 59 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 PDCD5O14737 125 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 RGS10O43665 173 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 HPRT1P00492 218 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 NQO2P16083 231 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 RAB3BP20337 219 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 FCGR2CP31995 323 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 TFPI2P48307 235 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 FAM24BQ8N5W8 94 aa9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 C6orf62Q9GZU0 229 aaPredicted RBP9.49□□□□□ -0.89
TUBA3D-202ENST00000409047 IGKV3-7A0A075B6H7 116 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 ERICH4A6NGS2 130 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 C15orf61A6NNL5 157 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 PPYP01298 95 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 TRAPPC2P0DI81 140 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 TRAPPC2BP0DI82 140 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 TMEM187Q14656 261 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 THOC7Q6I9Y2 204 aaKnown RBP9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 ZNF818PQ6ZRF7 136 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 Q6ZTC4 211 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 PRSS48Q7RTY5 328 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 GBGT1Q8N5D6 347 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 TMEM116Q8NCL8 245 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 AIFM2Q9BRQ8 373 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 PLEKHA2Q9HB19 425 aa9.48□□□□□ -0.89
TUBA3D-202ENST00000409047 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
TUBA3D-202ENST00000409047 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
TUBA3D-202ENST00000409047 ELOA3CA0A087WX78 387 aaPredicted RBP9.47□□□□□ -0.89
TUBA3D-202ENST00000409047 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
TUBA3D-202ENST00000409047 IGHV4-28A0A0C4DH34 117 aa9.47□□□□□ -0.89
TUBA3D-202ENST00000409047 TRDV1A0A1B0GX56 115 aa9.47□□□□□ -0.89
TUBA3D-202ENST00000409047 DBX1A6NMT0 343 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms