RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CBLN1P23435 193 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 RORCP51449 518 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 TSPAN5P62079 268 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 WDR89Q96FK6 387 aaPredicted RBP14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 CXorf58Q96LI9 332 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 TMEM213A2RRL7 107 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 TRAPPC2P0DI81 140 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 TRAPPC2BP0DI82 140 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 GPR183P32249 361 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 CTF1Q16619 201 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 OR1L8Q8NGR8 309 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 ZNF502Q8TBZ5 544 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 CITED4Q96RK1 184 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 NEURL2Q9BR09 285 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 HINT2Q9BX68 163 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 NDUFA4L2Q9NRX3 87 aa14.54□□□□□ -0.08
SMARCB1-204ENST00000407422 SERPINE2P07093 398 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 GUCA2BQ16661 112 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 FAM106AQ4KMX7 169 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 CASC10Q5T4H9 136 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 UNQ9165/PRO28630Q6UXU0 137 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 GDPD1Q8N9F7 314 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 WFDC10AQ9H1F0 79 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 TECRQ9NZ01 308 aaKnown RBP14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 OR51B2Q9Y5P1 312 aa14.53□□□□□ -0.08
SMARCB1-204ENST00000407422 IGHV3-35A0A0C4DH35 117 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 DBX1A6NMT0 343 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 A8MWP6 167 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 PTBP1P26599 531 aaKnown RBP eCLIP14.52□□□□□ -0.082e-9■■■■■ 39.5
SMARCB1-204ENST00000407422 RCVRNP35243 200 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 MFAP2P55001 183 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 TM4SF20Q53R12 229 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 RNASE12Q5GAN4 147 aaKnown RBP14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 LAX1Q8IWV1 398 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 MLXQ9UH92 298 aa14.52□□□□□ -0.08
SMARCB1-204ENST00000407422 TENM2Q9NT68 2774 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 M0QYG6 137 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 GABARAPO95166 117 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 TBC1D26Q86UD7 250 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 DEFB125Q8N687 156 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 UXS1Q8NBZ7 420 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 SLC2A8Q9NY64 477 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 THYN1Q9P016 225 aa14.52□□□□□ -0.09
SMARCB1-204ENST00000407422 SACSQ9NZJ4 4579 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 LYSTQ99698 3801 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 FAM25AB3EWG3 89 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 FAM25CB3EWG5 89 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 FAM25GB3EWG6 89 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 SNAPC5O75971 98 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 TPPPO94811 219 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 GPR107Q5VW38 600 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 THOC7Q6I9Y2 204 aaKnown RBP14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 SLC25A24Q6NUK1 477 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 LPCAT3Q6P1A2 487 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 LINC00322Q6ZN03 302 aaPredicted RBP14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 HSD17B13Q7Z5P4 300 aaPredicted RBP14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 TMEM61Q8N0U2 210 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 CADM3Q8N126 398 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 LSM10Q969L4 123 aaKnown RBP14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 SPATA25Q9BR10 227 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 KLK11Q9UBX7 282 aa14.51□□□□□ -0.09
SMARCB1-204ENST00000407422 IGHV3-21A0A0B4J1V1 117 aa14.5□□□□□ -0.09
SMARCB1-204ENST00000407422 MZT2AQ6P582 158 aa14.5□□□□□ -0.09
SMARCB1-204ENST00000407422 PLET1Q6UQ28 207 aa14.5□□□□□ -0.09
SMARCB1-204ENST00000407422 EDA2RQ9HAV5 297 aa14.5□□□□□ -0.09
SMARCB1-204ENST00000407422 OR2T8A6NH00 312 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 IGKV1-39P01597 117 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 IGKV1D-39P04432 117 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 UCP3P55916 312 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 ZNF57Q68EA5 555 aaPredicted RBP14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 SLC38A6Q8IZM9 456 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 VN1R17PQ8TDU5 208 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 RETNQ9HD89 108 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 TMEM14BQ9NUH8 114 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 PRNDQ9UKY0 176 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 F11RQ9Y624 299 aaKnown RBP14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 CEPT1Q9Y6K0 416 aa14.49□□□□□ -0.09
SMARCB1-204ENST00000407422 RBMY1BA6NDE4 496 aaKnown RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 RBMY1EA6NEQ0 496 aaKnown RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 OR11H12B2RN74 326 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 RBMY1DP0C7P1 496 aaKnown RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 LYL1P12980 280 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 ZNF182P17025 639 aaPredicted RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 BTNL8Q6UX41 500 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 OR52I2Q8NH67 350 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 AP3S1Q92572 193 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 SEC22AQ96IW7 307 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 EXTL2Q9UBQ6 330 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 C15orf61A6NNL5 157 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 CYB5BO43169 146 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 TGOLN2O43493 480 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 SCAF4O95104 1147 aaKnown RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 S100GP29377 79 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 OR5B3Q8NH48 314 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 SCARB1Q8WTV0 552 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 ABHD1Q96SE0 405 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 ZNF436Q9C0F3 470 aaPredicted RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 SRD5A3Q9H8P0 318 aa14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 FAM212BQ9NTI7 297 aaPredicted RBP14.48□□□□□ -0.09
SMARCB1-204ENST00000407422 RYR2Q92736 4967 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms