RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 C10orf91Q5T1B1 145 aa11.34□□□□□ -0.59
PRAME-205ENST00000405655 TREML4Q6UXN2 200 aa11.34□□□□□ -0.59
PRAME-205ENST00000405655 OR52E5Q8NH55 327 aa11.34□□□□□ -0.59
PRAME-205ENST00000405655 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
PRAME-205ENST00000405655 TMEM186Q96B77 213 aa11.34□□□□□ -0.59
PRAME-205ENST00000405655 CLEC7AQ9BXN2 247 aa11.34□□□□□ -0.59
PRAME-205ENST00000405655 GNG13Q9P2W3 67 aa11.34□□□□□ -0.59
PRAME-205ENST00000405655 LOC105371242A0A075B767 164 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 MDKP21741 143 aaPredicted RBP11.33□□□□□ -0.6
PRAME-205ENST00000405655 GATA2P23769 480 aaPredicted RBP11.33□□□□□ -0.6
PRAME-205ENST00000405655 TMEM30BQ3MIR4 351 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 MIC13Q5XKP0 118 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 HCP5Q6MZN7 132 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 SLC24A4Q8NFF2 622 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 MGST2Q99735 147 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 BPESC1Q9GZL8 116 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 TENM4Q6N022 2769 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 IGHV1-3A0A0C4DH29 117 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 RBFOX3A6NFN3 312 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 NPY1RP25929 384 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 SSBP2P81877 361 aaPredicted RBP11.33□□□□□ -0.6
PRAME-205ENST00000405655 ICAM4Q14773 271 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 PINX1Q96BK5 328 aaKnown RBP11.33□□□□□ -0.6
PRAME-205ENST00000405655 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.6
PRAME-205ENST00000405655 FCN1O00602 326 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 LIPFP07098 398 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 VWC2Q2TAL6 325 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 PDLIM3Q53GG5 364 aaPredicted RBP11.32□□□□□ -0.6
PRAME-205ENST00000405655 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 ZNF787Q6DD87 383 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 OR4C13Q8NGP0 309 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 CLDND2Q8NHS1 167 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 PLEKHA3Q9HB20 300 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 ZMAT5Q9UDW3 170 aaKnown RBP11.32□□□□□ -0.6
PRAME-205ENST00000405655 INSIG2Q9Y5U4 225 aa11.32□□□□□ -0.6
PRAME-205ENST00000405655 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
PRAME-205ENST00000405655 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
PRAME-205ENST00000405655 IGHV3-21A0A0B4J1V1 117 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 A1L4Q6 167 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 ZNF137PP52743 207 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 GNB1P62873 340 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
PRAME-205ENST00000405655 WT1-ASQ06250 92 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.65e-14■■□□□ 12.5
PRAME-205ENST00000405655 C8orf46Q8TAG6 207 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 OSR1Q8TAX0 266 aaPredicted RBP11.31□□□□□ -0.6
PRAME-205ENST00000405655 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
PRAME-205ENST00000405655 SEC11CQ9BY50 192 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 BET1LQ9NYM9 111 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 PRNDQ9UKY0 176 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
PRAME-205ENST00000405655 MAP1LC3B2A6NCE7 125 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 YIF1AO95070 293 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 RAB13P51153 203 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 DHRS7BQ6IAN0 325 aaPredicted RBP11.31□□□□□ -0.6
PRAME-205ENST00000405655 OR10G4Q8NGN3 311 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 OR10G9Q8NGN4 311 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 OR10G7Q8NGN6 311 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 OR2T6Q8NHC8 308 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 RAB39BQ96DA2 213 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 MAP1LC3BQ9GZQ8 125 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 WDR83OSQ9Y284 106 aa11.31□□□□□ -0.6
PRAME-205ENST00000405655 PTPN13Q12923 2485 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 IGKV1OR2-108A0A075B7D4 117 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 TIMM23O14925 209 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 PRRX1P54821 245 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 TLE4Q04727 773 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 SPATA31B1PQ5VZV4 182 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 CYB561D1Q8N8Q1 229 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 PCGF1Q9BSM1 259 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 COMMD5Q9GZQ3 224 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 MRPL36Q9P0J6 103 aaKnown RBP11.3□□□□□ -0.6
PRAME-205ENST00000405655 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 SCAF4O95104 1147 aaKnown RBP11.3□□□□□ -0.6
PRAME-205ENST00000405655 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
PRAME-205ENST00000405655 EFNA4P52798 201 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 PEA15Q15121 130 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 C8orf31Q8N9H6 132 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 RPEQ96AT9 228 aa11.3□□□□□ -0.6
PRAME-205ENST00000405655 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 AREGP15514 252 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 SVBPQ8N300 66 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 ZNF843Q8N446 348 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 TNFRSF14Q92956 283 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 RAB24Q969Q5 203 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 SLC39A9Q9NUM3 307 aa11.29□□□□□ -0.6
PRAME-205ENST00000405655 IGHV2-5P01817 119 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms