RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ADAMTSL5Q6ZMM2 481 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 TBC1D26Q86UD7 250 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 SLC38A6Q8IZM9 456 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 OR2K2Q8NGT1 345 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 RCHY1Q96PM5 261 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 TUBA4BQ9H853 241 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 ZC4H2Q9NQZ6 224 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 C19orf73Q9NVV2 129 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 THYN1Q9P016 225 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 KLK11Q9UBX7 282 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 OR51B2Q9Y5P1 312 aa10.09□□□□□ -0.79
SDF4-203ENST00000403997 A8MZ25 164 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 SERPINE2P07093 398 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 PGAM2P15259 253 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 ALDH3B2P48448 385 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 DEFB114Q30KQ6 69 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 HSD17B13Q7Z5P4 300 aaPredicted RBP10.08□□□□□ -0.8
SDF4-203ENST00000403997 CADM3Q8N126 398 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 GDPD1Q8N9F7 314 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 OR52I2Q8NH67 350 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 PRNDQ9UKY0 176 aa10.08□□□□□ -0.8
SDF4-203ENST00000403997 RGS5O15539 181 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 EDN2P20800 178 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 PTBP1P26599 531 aaKnown RBP eCLIP10.07□□□□□ -0.8
SDF4-203ENST00000403997 WT1-ASQ06250 92 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 RNASE10Q5GAN6 216 aaKnown RBP10.07□□□□□ -0.8
SDF4-203ENST00000403997 C15orf40Q8WUR7 153 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 LSM10Q969L4 123 aaKnown RBP10.07□□□□□ -0.8
SDF4-203ENST00000403997 ABHD1Q96SE0 405 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 TSC22D3Q99576 134 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 THAP7Q9BT49 309 aaPredicted RBP10.07□□□□□ -0.8
SDF4-203ENST00000403997 FAM212BQ9NTI7 297 aaPredicted RBP10.07□□□□□ -0.8
SDF4-203ENST00000403997 TECRQ9NZ01 308 aaKnown RBP10.07□□□□□ -0.8
SDF4-203ENST00000403997 MTFP1Q9UDX5 166 aa10.07□□□□□ -0.8
SDF4-203ENST00000403997 IGHV3-35A0A0C4DH35 117 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 ZNF785A8K8V0 405 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 TPPPO94811 219 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 CD3DP04234 171 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 CBLN1P23435 193 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 GPR183P32249 361 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 GUCA2BQ16661 112 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 PLET1Q6UQ28 207 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 H2BFWTQ7Z2G1 175 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 OR5B3Q8NH48 314 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 ZNF502Q8TBZ5 544 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 VN1R17PQ8TDU5 208 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 F11RQ9Y624 299 aaKnown RBP10.06□□□□□ -0.8
SDF4-203ENST00000403997 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
SDF4-203ENST00000403997 TENM3Q9P273 2699 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 IGHV3-21A0A0B4J1V1 117 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 CTDSP2O14595 271 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 PI3P19957 117 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 CD81P60033 236 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 SPCS2Q15005 226 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 TM4SF20Q53R12 229 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 CLVS1Q8IUQ0 354 aaPredicted RBP10.05□□□□□ -0.8
SDF4-203ENST00000403997 LAX1Q8IWV1 398 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 UXS1Q8NBZ7 420 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 OR4A16Q8NH70 328 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 SEC22AQ96IW7 307 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 NEURL2Q9BR09 285 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 TM2D3Q9BRN9 247 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 MIXL1Q9H2W2 232 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 PLEKHA3Q9HB20 300 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 PALMDQ9NP74 551 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
SDF4-203ENST00000403997 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
SDF4-203ENST00000403997 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 OR2T8A6NH00 312 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 DBX1A6NMT0 343 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 C15orf61A6NNL5 157 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 CD7P09564 240 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 TBPP20226 339 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 MFAP2P55001 183 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 PIGPP57054 158 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 RND3P61587 244 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 HAGHQ16775 308 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 ZNF57Q68EA5 555 aaPredicted RBP10.04□□□□□ -0.8
SDF4-203ENST00000403997 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 LHFPL1Q86WI0 220 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 ARRDC1Q8N5I2 433 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 TMEM229BQ8NBD8 167 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
SDF4-203ENST00000403997 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
SDF4-203ENST00000403997 ZNF486Q96H40 463 aaPredicted RBP10.04□□□□□ -0.8
SDF4-203ENST00000403997 HUWE1Q7Z6Z7 4374 aaKnown RBP10.03□□□□□ -0.8
SDF4-203ENST00000403997 A8MWP6 167 aa10.03□□□□□ -0.8
SDF4-203ENST00000403997 C3orf84H3BNL1 204 aa10.03□□□□□ -0.8
SDF4-203ENST00000403997 GABARAPH6UMI1 98 aa10.03□□□□□ -0.8
SDF4-203ENST00000403997 TGOLN2O43493 480 aa10.03□□□□□ -0.8
SDF4-203ENST00000403997 RAB3DO95716 219 aa10.03□□□□□ -0.8
SDF4-203ENST00000403997 PPP5CP53041 499 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms