RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FUSP35637 526 aaKnown RBP eCLIP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 XCL1P47992 114 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 GABRA4P48169 554 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 AP1S1P61966 158 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 HBA1P69905 142 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 AKR1C1Q04828 323 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 C12orf74Q32Q52 190 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 TRIQKQ629K1 86 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 CLDND2Q8NHS1 167 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 ZNF675Q8TD23 568 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 GNPDA2Q8TDQ7 276 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 SMCR5Q8TEV8 140 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 FAM172AQ8WUF8 416 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 FGF13Q92913 245 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 NIPSNAP1Q9BPW8 284 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 HOPXQ9BPY8 73 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 CCDC90BQ9GZT6 254 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 C11orf68Q9H3H3 251 aaKnown RBP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 TRABDQ9H4I3 376 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 XAGE1AQ9HD64 81 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 CISHQ9NSE2 258 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 TXNL4BQ9NX01 149 aaKnown RBP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 FBXL12Q9NXK8 326 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 FUT9Q9Y231 359 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 ZNF638Q14966 1978 aaKnown RBP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 ROBO3Q96MS0 1386 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 TRPM6Q9BX84 2022 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 hCG_1818297A0A087WSY0 165 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 IGHV3-15A0A0B4J1V0 119 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 A0A1W2PQD3 144 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 DPRXA6NFQ7 191 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 A8MT66 165 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 C2orf74A8MZ97 194 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 FNDC10F2Z333 226 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 ATG12O94817 140 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 IFNA1P01562 189 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 C8GP07360 202 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 RBP1P09455 135 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 P0DMU3 169 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 FAM231AP0DMU4 169 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 FAM231CP0DMU5 169 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BOP23527 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BBP33778 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 CA5AP35218 305 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 PSMD8P48556 350 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BDP58876 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BCP62807 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 SNCBQ16143 134 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST2H2BEQ16778 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 OR4C16Q8NGL9 310 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BHQ93079 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BNQ99877 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 HIST1H2BMQ99879 126 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 IL36BQ9NZH7 164 aa1.67□□□□□ -2.14
HMGB1P17-201ENST00000403495 PCNX2A6NKB5 2137 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 TRAV9-1A0A075B6T8 112 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 GGT3PA6NGU5 568 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 LEPROTO15243 131 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 HMGB3O15347 200 aaKnown RBP1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 S1PR2O95136 353 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 ZNF682O95780 498 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 PRM2P04554 102 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 BPGMP07738 259 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 CD24P25063 80 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 ERP29P30040 261 aaKnown RBP1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 HSPE1P61604 102 aaKnown RBP1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 MIAQ16674 131 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 C9orf64Q5T6V5 341 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 GOLT1AQ6ZVE7 132 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 OR11H6Q8NGC7 330 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 TOMM6Q96B49 74 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 C20orf27Q9GZN8 174 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 CENPHQ9H3R5 247 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 MRPL40Q9NQ50 206 aaKnown RBP1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 UTP11Q9Y3A2 253 aaKnown RBP1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 ROCK1Q13464 1354 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 REREQ9P2R6 1566 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 NLRC5Q86WI3 1866 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 MYO16Q9Y6X6 1858 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 DSCAML1Q8TD84 2053 aa1.66□□□□□ -2.14
HMGB1P17-201ENST00000403495 IGKV1D-43A0A0B4J1Z2 117 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 TRAPPC13A5PLN9 417 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 C11orf86A6NJI1 115 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 GNRH2O43555 120 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 UCHL1P09936 223 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 TFPTP0C1Z6 253 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 ZNF728P0DKX0 622 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 SULT1A3P0DMM9 295 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 SULT1A4P0DMN0 295 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 SMIM10L2AP0DMW4 78 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 SMIM10L2BP0DMW5 78 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 PPIBP23284 216 aaKnown RBP1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 HLA-DMBP28068 263 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 TAS2R41P59536 307 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 DEFA3P59666 94 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 RAB14P61106 215 aa1.65□□□□□ -2.15
HMGB1P17-201ENST00000403495 GNG3P63215 75 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms