RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SPIN2BQ9BPZ2 258 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 WNK1Q9H4A3 2382 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.48□□□□□ -0.41
HMGA1-204ENST00000401473 FKBP11Q9NYL4 201 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 ZNF257Q9Y2Q1 563 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 PKD1L1Q8TDX9 2849 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 PSMB11A5LHX3 300 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 SNRPGP15A8MWD9 76 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 PITX3O75364 302 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 AREGP15514 252 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 TMEM267Q0VDI3 215 aaPredicted RBP12.48□□□□□ -0.41
HMGA1-204ENST00000401473 SPINK9Q5DT21 86 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 C11orf44Q8N8P7 122 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 OR5AU1Q8NGC0 362 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 OR5B3Q8NH48 314 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 OR10C1Q96KK4 312 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 A0A1B0GU03 582 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 A0A1W2PN81 502 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 C7orf66A4D0T2 115 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 CCSO14618 274 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 NXPH3O95157 252 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 SULT1A3P0DMM9 295 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 SULT1A4P0DMN0 295 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 CHRNA7P36544 502 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 WT1-ASQ06250 92 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 SMCO1Q147U7 214 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 C19orf35Q6ZS72 473 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 LCNL1Q6ZST4 164 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 GPN1Q9HCN4 374 aaPredicted RBP12.47□□□□□ -0.41
HMGA1-204ENST00000401473 COA4Q9NYJ1 87 aa12.47□□□□□ -0.41
HMGA1-204ENST00000401473 PIGBOS1A0A0B4J2F0 54 aa12.46□□□□□ -0.41
HMGA1-204ENST00000401473 IGLV1-40P01703 118 aa12.46□□□□□ -0.41
HMGA1-204ENST00000401473 IGHG4P01861 327 aa12.46□□□□□ -0.41
HMGA1-204ENST00000401473 TRAPPC2P0DI81 140 aa12.46□□□□□ -0.41
HMGA1-204ENST00000401473 TRAPPC2BP0DI82 140 aa12.46□□□□□ -0.41
HMGA1-204ENST00000401473 KLK15Q9H2R5 256 aa12.46□□□□□ -0.41
HMGA1-204ENST00000401473 IFNA17P01571 189 aa12.46□□□□□ -0.42
HMGA1-204ENST00000401473 REG1AP05451 166 aa12.46□□□□□ -0.42
HMGA1-204ENST00000401473 CXorf66Q5JRM2 361 aaPredicted RBP12.46□□□□□ -0.42
HMGA1-204ENST00000401473 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.42
HMGA1-204ENST00000401473 TTC9CQ8N5M4 171 aa12.46□□□□□ -0.42
HMGA1-204ENST00000401473 GON7Q9BXV9 100 aa12.46□□□□□ -0.42
HMGA1-204ENST00000401473 ALG5Q9Y673 324 aa12.46□□□□□ -0.42
HMGA1-204ENST00000401473 CD28P10747 220 aa12.45□□□□□ -0.42
HMGA1-204ENST00000401473 SLC25A6P12236 298 aa12.45□□□□□ -0.42
HMGA1-204ENST00000401473 PSMB8P28062 276 aa12.45□□□□□ -0.42
HMGA1-204ENST00000401473 PRCDQ00LT1 54 aa12.45□□□□□ -0.42
HMGA1-204ENST00000401473 TMEM68Q96MH6 324 aa12.45□□□□□ -0.42
HMGA1-204ENST00000401473 IFNA21P01568 189 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 PRH1P02810 166 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 OR13C7P0DN81 318 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 CTRB1P17538 263 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 PDLIM3Q53GG5 364 aaPredicted RBP12.44□□□□□ -0.42
HMGA1-204ENST00000401473 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 C11orf87Q6NUJ2 197 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 TEX38Q6PEX7 206 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 OR52E5Q8NH55 327 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 C13orf42A0A1B0GVH6 325 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 CRYGCP07315 174 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 SLC35B1P78383 322 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 TNFRSF9Q07011 255 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 OR1S1Q8NH92 325 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 MS4A10Q96PG2 267 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 HSPB7Q9UBY9 170 aa12.44□□□□□ -0.42
HMGA1-204ENST00000401473 FBXO24O75426 580 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 PSMB6P28072 239 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 SPCS3P61009 180 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 CD83Q01151 205 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 KIAA0141Q14154 515 aaPredicted RBP12.43□□□□□ -0.42
HMGA1-204ENST00000401473 IAH1Q2TAA2 248 aaPredicted RBP12.43□□□□□ -0.42
HMGA1-204ENST00000401473 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 SPATA3Q8NHX4 192 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
HMGA1-204ENST00000401473 CITED1Q99966 193 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
HMGA1-204ENST00000401473 PDCD10Q9BUL8 212 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 DMRT1Q9Y5R6 373 aa12.43□□□□□ -0.42
HMGA1-204ENST00000401473 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 SIX6O95475 246 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 RPLP1P05386 114 aaKnown RBP12.42□□□□□ -0.42
HMGA1-204ENST00000401473 RAB9AP51151 201 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 ID3Q02535 119 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 RNF152Q8N8N0 203 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 OR5M8Q8NGP6 311 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 FANCD2OSQ96PS1 177 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
HMGA1-204ENST00000401473 GSKIPQ9P0R6 139 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 SSNA1O43805 119 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 ELANEP08246 267 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 PF4V1P10720 104 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 MFAP2P55001 183 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 FOXE3Q13461 319 aa12.42□□□□□ -0.42
HMGA1-204ENST00000401473 THOC7Q6I9Y2 204 aaKnown RBP12.42□□□□□ -0.42
HMGA1-204ENST00000401473 WDR89Q96FK6 387 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms