RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 COMMD5Q9GZQ3 224 aa10.69□□□□□ -0.7
VAMP1-203ENST00000400911 CCDC90BQ9GZT6 254 aa10.69□□□□□ -0.7
VAMP1-203ENST00000400911 C6orf62Q9GZU0 229 aaPredicted RBP10.69□□□□□ -0.7
VAMP1-203ENST00000400911 CCL28Q9NRJ3 127 aa10.69□□□□□ -0.7
VAMP1-203ENST00000400911 ANXA10Q9UJ72 324 aa10.69□□□□□ -0.7
VAMP1-203ENST00000400911 TPRKBQ9Y3C4 175 aa10.69□□□□□ -0.7
VAMP1-203ENST00000400911 TMEM235A6NFC5 223 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 SULT1C2O00338 296 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 UPK2O00526 184 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 DEFB4AO15263 64 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 RGS10O43665 173 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 SLC25A24Q6NUK1 477 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 OR11H2Q8NH07 326 aa10.68□□□□□ -0.7
VAMP1-203ENST00000400911 BSCL2Q96G97 398 aaPredicted RBP10.68□□□□□ -0.7
VAMP1-203ENST00000400911 SRSF8Q9BRL6 282 aaKnown RBP10.68□□□□□ -0.7
VAMP1-203ENST00000400911 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
VAMP1-203ENST00000400911 K7EMT4 169 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 NDUFA4O00483 81 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 SSX5O60225 188 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 OR13C7P0DN81 318 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 PTHLHP12272 177 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 RAB3BP20337 219 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 TFPI2P48307 235 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 TAS2R31P59538 309 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 ZNF773Q6PK81 442 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 NR2C2APQ86WQ0 139 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 GDPD1Q8N9F7 314 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 SECTM1Q8WVN6 248 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 CNBD2Q96M20 576 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 RNF2Q99496 336 aa10.67□□□□□ -0.7
VAMP1-203ENST00000400911 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
VAMP1-203ENST00000400911 C11orf68Q9H3H3 251 aaKnown RBP10.67□□□□□ -0.7
VAMP1-203ENST00000400911 SMIM30A4D0T7 59 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 IGLL5B9A064 214 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 CYB5BO43169 146 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 SERPINE2P07093 398 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 MYL9P24844 172 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 ADMP35318 185 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 MFAP2P55001 183 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 GNG2P59768 71 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 SPSB3Q6PJ21 355 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 UBAC2Q8NBM4 344 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 SCARB1Q8WTV0 552 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 TMEM140Q9NV12 185 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 C21orf62Q9NYP8 219 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 SMPXQ9UHP9 88 aa10.66□□□□□ -0.7
VAMP1-203ENST00000400911 IGKV3-7A0A075B6H7 116 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 TEX50A0A1B0GTY4 177 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 C15orf62A8K5M9 175 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 F8W735 103 aaPredicted RBP10.65□□□□□ -0.7
VAMP1-203ENST00000400911 RBFOX2O43251 390 aaKnown RBP eCLIP10.65□□□□□ -0.78e-6■■□□□ 11.5
VAMP1-203ENST00000400911 HPRT1P00492 218 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 TRAPPC2P0DI81 140 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 TRAPPC2BP0DI82 140 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 NQO2P16083 231 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 FCGR2CP31995 323 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 TCTAP57738 103 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 POU2AF1Q16633 256 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 PRSS48Q7RTY5 328 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 DMBX1Q8NFW5 382 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 OR13F1Q8NGS4 319 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 APLNQ9ULZ1 77 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 ETV7Q9Y603 341 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 DNAH17Q9UFH2 4485 aa10.65□□□□□ -0.7
VAMP1-203ENST00000400911 IGHV3-49A0A0A0MS15 119 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 CHEK1O14757 476 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 XRCC3O43542 346 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
VAMP1-203ENST00000400911 MSMO1Q15800 293 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 Q56UQ5 140 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 GBGT1Q8N5D6 347 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 TMEM116Q8NCL8 245 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
VAMP1-203ENST00000400911 F11RQ9Y624 299 aaKnown RBP10.64□□□□□ -0.71
VAMP1-203ENST00000400911 IGHV7-4-1A0A0J9YVY3 117 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 TRDV1A0A1B0GX56 115 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 CA1P00915 261 aaPredicted RBP10.63□□□□□ -0.71
VAMP1-203ENST00000400911 PPYP01298 95 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 CTSGP08311 255 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 ARPC4P59998 168 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 C22orf42Q6IC83 251 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 GVQW1Q8N7I0 195 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 OR51H1Q8NH63 302 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 ATP6V0BQ99437 205 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 HINT2Q9BX68 163 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 SLC5A7Q9GZV3 580 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 PLEKHA2Q9HB19 425 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 NDUFA4L2Q9NRX3 87 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 DNAH11Q96DT5 4516 aa10.63□□□□□ -0.71
VAMP1-203ENST00000400911 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 IGHV3OR16-13A0A075B7E8 117 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 IGHV3-74A0A0B4J1X5 117 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 K7EIM0 57 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 YIF1AO95070 293 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 FGF2P09038 288 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 FXYD4P59646 89 aa10.62□□□□□ -0.71
VAMP1-203ENST00000400911 CATR1Q13166 79 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms