RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TMEM229BQ8NBD8 167 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 RNASE11Q8TAA1 199 aaKnown RBP6.44□□□□□ -1.38
USP16-202ENST00000399973 DYNLRB2Q8TF09 96 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 SMIM4Q8WVI0 70 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 EEF1AKMT3Q96AZ1 226 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 ZC4H2Q9NQZ6 224 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 COPZ2Q9P299 210 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 OR51B2Q9Y5P1 312 aa6.44□□□□□ -1.38
USP16-202ENST00000399973 IGLV11-55A0A075B6I3 123 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 TEX50A0A1B0GTY4 177 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 MFSD2BA6NFX1 497 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 C15orf61A6NNL5 157 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 DISC1C4P0D8 188 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 H0Y980 276 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 CYB5BO43169 146 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 TPPPO94811 219 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 CRYGCP07315 174 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 AKAIN1P0CW23 69 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 GP9P14770 177 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 GPR183P32249 361 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 UCP3P55916 312 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 KLF5Q13887 457 aaPredicted RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 MEF2DQ14814 521 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 TRIM16LQ309B1 348 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 THOC7Q6I9Y2 204 aaKnown RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 LHFPL1Q86WI0 220 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 GDPD1Q8N9F7 314 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 OR1L8Q8NGR8 309 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 OR13C8Q8NGS7 320 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 OR4A16Q8NH70 328 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 MARCH1Q8TCQ1 289 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 LSM10Q969L4 123 aaKnown RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 ZNF486Q96H40 463 aaPredicted RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 CCDC140Q96MF4 163 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 FANCD2OSQ96PS1 177 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 TSC22D3Q99576 134 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 ASCL2Q99929 193 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 B9D2Q9BPU9 175 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 SLIRPQ9GZT3 109 aaKnown RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 PEMTQ9UBM1 199 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 PRNDQ9UKY0 176 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 C14orf166Q9Y224 244 aaKnown RBP6.43□□□□□ -1.38
USP16-202ENST00000399973 SMAD5-AS1Q9Y6J3 95 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 SORL1Q92673 2214 aa6.43□□□□□ -1.38
USP16-202ENST00000399973 IGHV3-21A0A0B4J1V1 117 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 C3orf85A0A1B0GTC6 90 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 DBX1A6NMT0 343 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 GGCTO75223 188 aaKnown RBP6.42□□□□□ -1.38
USP16-202ENST00000399973 OR2C1O95371 312 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 IGKV1-39P01597 117 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 IGLV1-51P01701 117 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 CD74P04233 296 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 IGKV1D-39P04432 117 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 EDN2P20800 178 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 RND3P61587 244 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 SSBP1Q04837 148 aaKnown RBP6.42□□□□□ -1.38
USP16-202ENST00000399973 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 IZUMO4Q1ZYL8 232 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 SP6Q3SY56 376 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 SPINK9Q5DT21 86 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 FAM209BQ5JX69 171 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 SLC25A24Q6NUK1 477 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 HSD17B13Q7Z5P4 300 aaPredicted RBP6.42□□□□□ -1.38
USP16-202ENST00000399973 UBAC2Q8NBM4 344 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 OR4C16Q8NGL9 310 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 ZFAND1Q8TCF1 268 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 CACNG8Q8WXS5 425 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 CXorf58Q96LI9 332 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 TMEM56Q96MV1 263 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 TP53RKQ96S44 253 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 SRSF8Q9BRL6 282 aaKnown RBP6.42□□□□□ -1.38
USP16-202ENST00000399973 MCUBQ9NWR8 336 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 FKBP11Q9NYL4 201 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 THYN1Q9P016 225 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 RSL24D1Q9UHA3 163 aaKnown RBP6.42□□□□□ -1.38
USP16-202ENST00000399973 LSM4Q9Y4Z0 139 aaKnown RBP6.42□□□□□ -1.38
USP16-202ENST00000399973 SELENOKQ9Y6D0 94 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 CEPT1Q9Y6K0 416 aa6.42□□□□□ -1.38
USP16-202ENST00000399973 COL7A1Q02388 2944 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 IGHV3-35A0A0C4DH35 117 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 TEX13DA0A0J9YY54 714 aaPredicted RBP6.41□□□□□ -1.38
USP16-202ENST00000399973 ZNF320A2RRD8 509 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 FABP12A6NFH5 140 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 CTDSPLO15194 276 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 CTSDP07339 412 aaPredicted RBP6.41□□□□□ -1.38
USP16-202ENST00000399973 CSN3P07498 182 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 FGF2P09038 288 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 TNFSF8P32971 234 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 LCN12Q6JVE5 192 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 GTSCR1Q86UQ5 136 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 SLC35G3Q8N808 338 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 OR5B3Q8NH48 314 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 TERB2Q8NHR7 220 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 MISP3Q96FF7 219 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 SEC22AQ96IW7 307 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 PDCD10Q9BUL8 212 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 PLEKHA3Q9HB20 300 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
USP16-202ENST00000399973 FAM212BQ9NTI7 297 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms