RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCL5P13501 91 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 ERCC8Q13216 396 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 DEFB109BQ30KR1 87 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 DMRTC1Q5HYR2 192 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 ANKRD34AQ69YU3 496 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 NUP98P52948 1817 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 UBE2V1Q13404 147 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 NPDC1Q9NQX5 325 aaPredicted RBP7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 SS18Q15532 418 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 SAXO1Q8IYX7 474 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 PRR14Q9BWN1 585 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 NUP153P49790 1475 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 IGKV3D-20A0A0C4DH25 116 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 A0A1B0GX51 115 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 RND2P52198 227 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 GLCCI1Q86VQ1 547 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 OR9G1Q8NH87 305 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 WDYHV1Q96HA8 205 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 HIKESHIQ53FT3 197 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 ZNF740Q8NDX6 193 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 PTPN13Q12923 2485 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 NPIPB11E5RHQ5 1161 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 IFI27L1Q96BM0 104 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 EMCNQ9ULC0 261 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 DUSP14O95147 198 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 LSM6P62312 80 aaKnown RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 FAM27D1Q5T7N8 215 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 RMI2Q96E14 147 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 KLRG1Q96E93 195 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 FAM90A27PA6NNH2 459 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 IL11RAQ14626 422 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 TMEM167AQ8TBQ9 72 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 ITLN2Q8WWU7 325 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 TSKUQ8WUA8 353 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 FXYD3Q14802 87 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 GREB1LQ9C091 1923 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 COL10A1Q03692 680 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 SPRYD7Q5W111 196 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 WTIPA6NIX2 430 aaPredicted RBP7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 SPNP16150 400 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 CLDN14O95500 239 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 APELAP0DMC3 54 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 C3AR1Q16581 482 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 SLC25A28Q96A46 364 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 CACNG4Q9UBN1 327 aa7.38□□□□□ -1.23
CACNA1C-220ENST00000399655 SIGLEC14Q08ET2 396 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 TMEM144Q7Z5S9 345 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 GMLQ99445 158 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 CXCL13O43927 109 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 RNASE4P34096 147 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 CXCL5P42830 114 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 LYRM9A8MSI8 78 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 KLK2P20151 261 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 FAM72AQ5TYM5 149 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 STHQ8IWL8 128 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 CD27P26842 260 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 BCDIN3DQ7Z5W3 292 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 PPP1R27Q86WC6 154 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 LAMB4A4D0S4 1761 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 RGPD4Q7Z3J3 1758 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 DISP1Q96F81 1524 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 PRSS23O95084 383 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 MESP1Q9BRJ9 268 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 CEACAM1P13688 526 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 ALKQ9UM73 1620 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 TRAV13-2A0A0B4J235 113 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 CENPVQ7Z7K6 275 aaPredicted RBP7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 C17orf47Q8NEP4 570 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 ZNF488Q96MN9 340 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 SNAI2O43623 268 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 WFDC6Q9BQY6 131 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 H3BTX0 84 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 HTN3P15516 51 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 C14orf132Q9NPU4 83 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 ECM29Q5VYK3 1845 aa7.37□□□□□ -1.23
CACNA1C-220ENST00000399655 WDR38Q5JTN6 314 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 SPATA31D1Q6ZQQ2 1576 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 TP53INP2Q8IXH6 220 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 NPWQ8N729 165 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 TCRBV5S2A0A599 114 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 ZFPL1O95159 310 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 PRSS36Q5K4E3 855 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 ZNF625Q96I27 306 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 EAF1Q96JC9 268 aaPredicted RBP7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 TIMM21Q9BVV7 248 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 FZR1Q9UM11 496 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 FOXB2Q5VYV0 432 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 C20orf173Q96LM9 149 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 METRNLQ641Q3 311 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 MFRPQ9BY79 579 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 BCORL1Q5H9F3 1711 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 TMEM222Q9H0R3 208 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 CCL1P22362 96 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 GLIS1Q8NBF1 620 aa7.36□□□□□ -1.23
CACNA1C-220ENST00000399655 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms