RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
APOB-202ENST00000399256 C20orf202A1L168 122 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 ZNF324O75467 553 aaPredicted RBP11.54□□□□□ -0.56
APOB-202ENST00000399256 IGFBP2P18065 325 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 ERVK-16P61578 105 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 RELBQ01201 579 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 OR10J3Q5JRS4 329 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 WDR73Q6P4I2 378 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 TEPPQ6URK8 271 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 NIT1Q86X76 327 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 TCF19Q9Y242 345 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 NBEAQ8NFP9 2946 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 DPRXA6NFQ7 191 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 AHRRA9YTQ3 701 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 BMPR1BO00238 502 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 SPINT2O43291 252 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 HINT1P49773 126 aaPredicted RBP11.54□□□□□ -0.56
APOB-202ENST00000399256 TMPRSS3P57727 454 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 SSPNQ14714 243 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 ABHD17BQ5VST6 288 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 FAM122AQ96E09 287 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 SERTAD4Q9NUC0 356 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 TMEM140Q9NV12 185 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 GNG12Q9UBI6 72 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 LY96Q9Y6Y9 160 aa11.54□□□□□ -0.56
APOB-202ENST00000399256 CCL25O15444 150 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 MT-ND6P03923 174 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 ZNF883P0CG24 379 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 MRPL49Q13405 166 aaKnown RBP11.53□□□□□ -0.56
APOB-202ENST00000399256 LCN12Q6JVE5 192 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 GCNT2Q8N0V5 402 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 FAM216AQ8WUB2 273 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 FZR1Q9UM11 496 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 PTPRBP23467 1997 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 SP1P08047 785 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 MGST1P10620 155 aaKnown RBP11.53□□□□□ -0.56
APOB-202ENST00000399256 GABRA6Q16445 453 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
APOB-202ENST00000399256 SAA2-SAA4A0A096LPE2 208 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 CA1P00915 261 aaPredicted RBP11.53□□□□□ -0.56
APOB-202ENST00000399256 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 GCM1Q9NP62 436 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 CDC42EP3Q9UKI2 254 aa11.53□□□□□ -0.56
APOB-202ENST00000399256 C15orf65H3BRN8 121 aa11.52□□□□□ -0.56
APOB-202ENST00000399256 CA2P00918 260 aa11.52□□□□□ -0.56
APOB-202ENST00000399256 MYOD1P15172 320 aa11.52□□□□□ -0.56
APOB-202ENST00000399256 PRRX1P54821 245 aa11.52□□□□□ -0.56
APOB-202ENST00000399256 UNQ5815/PRO19632Q6UWF5 114 aa11.52□□□□□ -0.56
APOB-202ENST00000399256 C6orf15Q6UXA7 325 aaPredicted RBP11.52□□□□□ -0.56
APOB-202ENST00000399256 KLF14Q8TD94 323 aaPredicted RBP11.52□□□□□ -0.56
APOB-202ENST00000399256 URB1O60287 2271 aaKnown RBP11.52□□□□□ -0.57
APOB-202ENST00000399256 AMY1AP04745 511 aa11.52□□□□□ -0.57
APOB-202ENST00000399256 NPY1RP25929 384 aa11.52□□□□□ -0.57
APOB-202ENST00000399256 DUSP3P51452 185 aaPredicted RBP11.52□□□□□ -0.57
APOB-202ENST00000399256 TIGITQ495A1 244 aa11.52□□□□□ -0.57
APOB-202ENST00000399256 WDR82Q6UXN9 313 aa11.52□□□□□ -0.57
APOB-202ENST00000399256 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.57
APOB-202ENST00000399256 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
APOB-202ENST00000399256 LYZL6O75951 148 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 OR10J4P0C629 311 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
APOB-202ENST00000399256 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
APOB-202ENST00000399256 CACNA1HO95180 2353 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 AREGP15514 252 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 S1PR3Q99500 378 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 IL19Q9UHD0 177 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 OR7C2O60412 319 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 APCSP02743 223 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 GATA2P23769 480 aaPredicted RBP11.51□□□□□ -0.57
APOB-202ENST00000399256 RAB31Q13636 194 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 IBA57Q5T440 356 aaKnown RBP11.51□□□□□ -0.57
APOB-202ENST00000399256 MOB3BQ86TA1 216 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 CD177Q8N6Q3 437 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 OSTCQ9NRP0 149 aa11.51□□□□□ -0.57
APOB-202ENST00000399256 PRR33A8MZF0 331 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 ADH4P08319 380 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 MORN2Q502X0 79 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 SSBP3Q9BWW4 388 aaPredicted RBP11.5□□□□□ -0.57
APOB-202ENST00000399256 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.5□□□□□ -0.57
APOB-202ENST00000399256 GGTLC3B5MD39 225 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 MMP23AO75900 390 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 LINC00869P0C866 280 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
APOB-202ENST00000399256 TSPOP30536 169 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 ZNF134P52741 427 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 SLAQ13239 276 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 UTF1Q5T230 341 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 STUMQ69YW2 141 aa11.5□□□□□ -0.57
APOB-202ENST00000399256 KLHDC1Q8N7A1 406 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms