RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OR5B21A6NL26 309 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 CXorf1O96002 111 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 CYB561P49447 251 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 CAMPP49913 170 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 MOB3BQ86TA1 216 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 MDP1Q86V88 176 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 Q8N7P7 452 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 CEP250Q9BV73 2442 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 AHRRA9YTQ3 701 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 M0R1X1 148 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 CER1O95813 267 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 TDGF1P13385 188 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 MAGEA5P43359 124 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 SELENOTP62341 195 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 Q0VFX4 171 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 COTL1Q14019 142 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 MIR17HGQ75NE6 70 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 LYG1Q8N1E2 194 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 LINC00479Q96M42 142 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 RTL8AQ9BWD3 113 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 GGTLC1Q9BX51 225 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 PLEKHA3Q9HB20 300 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 MPC1Q9Y5U8 109 aa8.19□□□□□ -1.1
PTCHD4-202ENST00000398738 PMCHL1Q16048 86 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 RNASEKQ6P5S7 137 aaKnown RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 MCRIP2Q9BUT9 160 aaKnown RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 SSBP4Q9BWG4 385 aaPredicted RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 CLEC7AQ9BXN2 247 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 SLC35D1Q9NTN3 355 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 TMEM30CPA0ZSE6 113 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 HSBP1O75506 76 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 STAG3L2P0CL84 134 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 STAG3L3P0CL85 134 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 STPG3Q8N7X2 389 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 ZNF439Q8NDP4 499 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 OR2Y1Q8NGV0 311 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 ZC2HC1AQ96GY0 325 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 GMPPAQ96IJ6 420 aaPredicted RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 CDX2Q99626 313 aaPredicted RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 ALKBH7Q9BT30 221 aaPredicted RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 TRBV6-6A0A0A6YYG2 114 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 CD24P25063 80 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 HOXC12P31275 282 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 GPR12P47775 334 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 EFNB3Q15768 340 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 LYSMD4Q5XG99 296 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 Q6ZR03 302 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 MOB1BQ7L9L4 216 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 Q8N976 141 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 OR13A1Q8NGR1 328 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 SLC45A2Q9UMX9 530 aa8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 COL5A1P20908 1838 aaPredicted RBP8.18□□□□□ -1.1
PTCHD4-202ENST00000398738 RAB29O14966 203 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 ZNF324O75467 553 aaPredicted RBP8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 PRB4P10163 310 aaPredicted RBP8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 IGFBP2P18065 325 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 RBX1P62877 108 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 PLGLB1Q02325 96 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 FOXF2Q12947 444 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 TIGITQ495A1 244 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 STUMQ69YW2 141 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 SLC24A4Q8NFF2 622 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 FAM168AQ92567 244 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 BET1LQ9NYM9 111 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 A0A1W2PN81 502 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 SH2D7A6NKC9 451 aaPredicted RBP8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 VSTM5A8MXK1 200 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 DNPH1O43598 174 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 CA2P00918 260 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 TSPOP30536 169 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 ZNF738Q8NE65 137 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 KCNS1Q96KK3 526 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 SH2D2AQ9NP31 389 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 CLEC5AQ9NY25 188 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 POLDIP2Q9Y2S7 368 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 LOXL2Q9Y4K0 774 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 V9GYV3 84 aa8.17□□□□□ -1.1
PTCHD4-202ENST00000398738 LOC102723996A0A087X1L8 192 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 LNP1A1A4G5 178 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 BMPR1BO00238 502 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 IGHV3-48P01763 117 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 USF1P22415 310 aaPredicted RBP8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 EPHA8P29322 1005 aaPredicted RBP8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 ARR3P36575 388 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 FABP6P51161 128 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 RPL8P62917 257 aaKnown RBP8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 MLANAQ16655 118 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 LINC00596Q86U02 117 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 GCNT2Q8N0V5 402 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 DEFB123Q8N688 67 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 TCTEX1D1Q8N7M0 179 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 RPH3ALQ9UNE2 315 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 LY6G6EA0A0G2JKS1 128 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 M0R2Z0 102 aa8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 CRYABP02511 175 aaKnown RBP8.16□□□□□ -1.1
PTCHD4-202ENST00000398738 APCSP02743 223 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms