RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 RBMXL2O75526 392 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 AREGP15514 252 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 NMSQ5H8A3 153 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 ZNF429Q86V71 674 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 FAM110DQ8TAY7 271 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 PALMDQ9NP74 551 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 ZNF257Q9Y2Q1 563 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 TET2Q6N021 2002 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 DUXBA0A1W2PPF3 345 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 IGLC7A0M8Q6 106 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 DUS4LO95620 317 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 PF4V1P10720 104 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 KHDC1LQ5JSQ8 128 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 TTC9CQ8N5M4 171 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 OR10W1Q8NGF6 305 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 MYOZ3Q8TDC0 251 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 CACNG5Q9UF02 275 aa13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 TSSC4Q9Y5U2 329 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-204ENST00000398519 TRRAPQ9Y4A5 3859 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 PIGBOS1A0A0B4J2F0 54 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 ST8SIA3O43173 380 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 RAB9AP51151 201 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 TMEM65Q6PI78 240 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 C19orf35Q6ZS72 473 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 MS4A10Q96PG2 267 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 SRSF8Q9BRL6 282 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 HINT2Q9BX68 163 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 COA4Q9NYJ1 87 aa13.53□□□□□ -0.24
CSNK1D-204ENST00000398519 A0A1W2PRX2 142 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 NPIPB5A8MRT5 1133 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 REG1AP05451 166 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 PSMB6P28072 239 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 RPL23AP62750 156 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 WT1-ASQ06250 92 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 KIAA0141Q14154 515 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 NSUN5P1Q3KNT7 163 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 AARDQ4LEZ3 155 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 THOC7Q6I9Y2 204 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 PLET1Q6UQ28 207 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 COQ8AQ8NI60 647 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 MITD1Q8WV92 249 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 SEC22CQ9BRL7 303 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 ZNF355PQ9NSJ1 428 aa13.52□□□□□ -0.25
CSNK1D-204ENST00000398519 VWFP04275 2813 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 H3BUA1 57 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 BRI3O95415 125 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 PRH1P02810 166 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 CRYGCP07315 174 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 SPNP16150 400 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 CTRB1P17538 263 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 PRCDQ00LT1 54 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 CTRB2Q6GPI1 263 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 C18orf65Q6ZTR6 163 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 ZFP57Q9NU63 452 aa13.51□□□□□ -0.25
CSNK1D-204ENST00000398519 HOXB5P09067 269 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 SULT1A3P0DMM9 295 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 SULT1A4P0DMN0 295 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 TPPP2P59282 170 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 DCTN2Q13561 401 aaKnown RBP13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 SPINK9Q5DT21 86 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 HSD17B13Q7Z5P4 300 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 ZNF491Q8N8L2 437 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 ZNF431Q8TF32 576 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 MARVELD1Q9BSK0 173 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 SLA2Q9H6Q3 261 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 TMED3Q9Y3Q3 217 aa13.5□□□□□ -0.25
CSNK1D-204ENST00000398519 ADAP1O75689 374 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 PTTG1O95997 202 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 IFNA17P01571 189 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 TRGV3P03979 118 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 DEFA5Q01523 94 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 SMCO1Q147U7 214 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 C2orf68Q2NKX9 166 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 GGNBP1Q5YKI7 109 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 PDCD10Q9BUL8 212 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 A0A1B0GU03 582 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 INMT-MINDY4F8WBC2 141 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 IL5P05113 134 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 CDX1P47902 265 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 KLHL30-AS1Q8NEE0 82 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 OR52E5Q8NH55 327 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 UBE2E2Q96LR5 201 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
CSNK1D-204ENST00000398519 TRBV9A0A0B4J1U6 114 aa13.48□□□□□ -0.25
CSNK1D-204ENST00000398519 NXPH3O95157 252 aa13.48□□□□□ -0.25
CSNK1D-204ENST00000398519 SPCS3P61009 180 aa13.48□□□□□ -0.25
CSNK1D-204ENST00000398519 PDLIM3Q53GG5 364 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-204ENST00000398519 FANCD2OSQ96PS1 177 aa13.48□□□□□ -0.25
CSNK1D-204ENST00000398519 GNB4Q9HAV0 340 aa13.48□□□□□ -0.25
CSNK1D-204ENST00000398519 MPTX1A8MV57 137 aa13.47□□□□□ -0.25
CSNK1D-204ENST00000398519 NUDT19A8MXV4 375 aa13.47□□□□□ -0.25
CSNK1D-204ENST00000398519 M0QZ24 198 aa13.47□□□□□ -0.25
CSNK1D-204ENST00000398519 PITX3O75364 302 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms