RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 TRGV3P03979 118 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 KIAA0141Q14154 515 aaPredicted RBP19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 ANKRD55Q3KP44 614 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 MZT2BQ6NZ67 158 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 C8orf86Q6ZUL3 223 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 OR1L8Q8NGR8 309 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 MYOZ3Q8TDC0 251 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 OR5B12Q96R08 314 aa19.75■□□□□ 0.75
TMEM55B-202ENST00000398020 TRAV6A0A075B6T7 132 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 FAM240BA0A1B0GVZ2 78 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 SFT2D2O95562 160 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 RGS21Q2M5E4 152 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 Q6ZRM9 215 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 LYZL2Q7Z4W2 148 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 TTC9CQ8N5M4 171 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 ZNF491Q8N8L2 437 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 NDUFA4L2Q9NRX3 87 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 NUDT15Q9NV35 164 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 FKBP11Q9NYL4 201 aa19.74■□□□□ 0.75
TMEM55B-202ENST00000398020 IGLC7A0M8Q6 106 aa19.73■□□□□ 0.75
TMEM55B-202ENST00000398020 TRAPPC2P0DI81 140 aa19.73■□□□□ 0.75
TMEM55B-202ENST00000398020 TRAPPC2BP0DI82 140 aa19.73■□□□□ 0.75
TMEM55B-202ENST00000398020 LGI3Q8N145 548 aa19.73■□□□□ 0.75
TMEM55B-202ENST00000398020 IL22RA2Q969J5 263 aa19.73■□□□□ 0.75
TMEM55B-202ENST00000398020 GNB4Q9HAV0 340 aa19.73■□□□□ 0.75
TMEM55B-202ENST00000398020 HLA-AP01891 365 aaKnown RBP19.72■□□□□ 0.75
TMEM55B-202ENST00000398020 OR4E1P0C645 316 aa19.72■□□□□ 0.75
TMEM55B-202ENST00000398020 CDX1P47902 265 aaPredicted RBP19.72■□□□□ 0.75
TMEM55B-202ENST00000398020 DEFB136Q30KP8 78 aa19.72■□□□□ 0.75
TMEM55B-202ENST00000398020 OR5B3Q8NH48 314 aa19.72■□□□□ 0.75
TMEM55B-202ENST00000398020 GPR146Q96CH1 333 aa19.72■□□□□ 0.75
TMEM55B-202ENST00000398020 C9orf170A2RU37 121 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 PSMB6P28072 239 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 UBE2MP61081 183 aaKnown RBP19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 SRPXP78539 464 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 C4orf46Q504U0 113 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 SPINK9Q5DT21 86 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 Q6ZNX1 250 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 UBE2E2Q96LR5 201 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 DUX3Q96PT4 197 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 SLA2Q9H6Q3 261 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 IGHV3-11P01762 117 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 WT1-ASQ06250 92 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 PRR31Q5SQ13 230 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 FAM219AQ8IW50 185 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 OR4F17Q8NGA8 305 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 OR4F4Q96R69 305 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 CACNG5Q9UF02 275 aa19.71■□□□□ 0.75
TMEM55B-202ENST00000398020 A0A0B4J2A0 478 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 NPIPB5A8MRT5 1133 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 H3BUA1 57 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 ST8SIA3O43173 380 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 OR13C7P0DN81 318 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 RAB25P57735 213 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 DHRS2Q13268 280 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 ENKURQ8TC29 256 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 ALX4Q9H161 411 aaPredicted RBP19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 SHPKQ9UHJ6 478 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 ZNF257Q9Y2Q1 563 aa19.7■□□□□ 0.74
TMEM55B-202ENST00000398020 CTRB1P17538 263 aa19.69■□□□□ 0.74
TMEM55B-202ENST00000398020 MECP2P51608 486 aaKnown RBP19.69■□□□□ 0.74
TMEM55B-202ENST00000398020 HSPE1P61604 102 aaKnown RBP19.69■□□□□ 0.74
TMEM55B-202ENST00000398020 CTRB2Q6GPI1 263 aa19.69■□□□□ 0.74
TMEM55B-202ENST00000398020 ZNF429Q86V71 674 aa19.69■□□□□ 0.74
TMEM55B-202ENST00000398020 LSM10Q969L4 123 aaKnown RBP19.69■□□□□ 0.74
TMEM55B-202ENST00000398020 CRYGCP07315 174 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 LYG2Q86SG7 212 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 OR52B4Q8NGK2 314 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 C4orf3Q8WVX3 66 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 IFNA17P01571 189 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 DEFA4P12838 97 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 RHOGP84095 191 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 PRCDQ00LT1 54 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 OXA1LQ15070 435 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 NMSQ5H8A3 153 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 NRARPQ7Z6K4 114 aa19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 SRSF8Q9BRL6 282 aaKnown RBP19.68■□□□□ 0.74
TMEM55B-202ENST00000398020 CMYA5Q8N3K9 4069 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 NXPH3O95157 252 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 H2AFB2P0C5Z0 115 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 THOC7Q6I9Y2 204 aaKnown RBP19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 TREML4Q6UXN2 200 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 ETV3LQ6ZN32 361 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 LRTM2Q8N967 370 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 RAX2Q96IS3 184 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 PDCD10Q9BUL8 212 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 MGAM2Q2M2H8 2515 aa19.67■□□□□ 0.74
TMEM55B-202ENST00000398020 OR2J3O76001 311 aa19.66■□□□□ 0.74
TMEM55B-202ENST00000398020 BRI3O95415 125 aa19.66■□□□□ 0.74
TMEM55B-202ENST00000398020 PF4P02776 101 aa19.66■□□□□ 0.74
TMEM55B-202ENST00000398020 DEFA1P59665 94 aa19.66■□□□□ 0.74
TMEM55B-202ENST00000398020 DEFA3P59666 94 aa19.66■□□□□ 0.74
TMEM55B-202ENST00000398020 TRBV9A0A0B4J1U6 114 aa19.65■□□□□ 0.74
TMEM55B-202ENST00000398020 C13orf42A0A1B0GVH6 325 aa19.65■□□□□ 0.74
TMEM55B-202ENST00000398020 I3L521 148 aa19.65■□□□□ 0.74
TMEM55B-202ENST00000398020 HOXB5P09067 269 aa19.65■□□□□ 0.74
TMEM55B-202ENST00000398020 FANCD2OSQ96PS1 177 aa19.65■□□□□ 0.74
TMEM55B-202ENST00000398020 DUS4LO95620 317 aaKnown RBP19.65■□□□□ 0.74
TMEM55B-202ENST00000398020 DHFRP00374 187 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms