RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 UNQ9165/PRO28630Q6UXU0 137 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 C19orf35Q6ZS72 473 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 PRSS48Q7RTY5 328 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 ZNF502Q8TBZ5 544 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 TCTEX1D2Q8WW35 142 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 SRSF8Q9BRL6 282 aaKnown RBP6.49□□□□□ -1.37
CAPN3-208ENST00000397204 ATG5Q9H1Y0 275 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 BET1LQ9NYM9 111 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 S4R3C0 116 aa6.49□□□□□ -1.37
CAPN3-208ENST00000397204 MFSD2BA6NFX1 497 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 CYB5BO43169 146 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 HNRNPCP07910 306 aaKnown RBP eCLIP6.48□□□□□ -1.37
CAPN3-208ENST00000397204 FGF2P09038 288 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 RAB3BP20337 219 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 OR2B8PP59922 312 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 MSMO1Q15800 293 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 DEFB135Q30KP9 77 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 SSX9Q7RTT3 188 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 RPP25LQ8N5L8 163 aaKnown RBP6.48□□□□□ -1.37
CAPN3-208ENST00000397204 VN1R17PQ8TDU5 208 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 GIMAP1Q8WWP7 306 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 GALNT14Q96FL9 552 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 ATP6V0BQ99437 205 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 ZNF436Q9C0F3 470 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-208ENST00000397204 CCDC90BQ9GZT6 254 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 TAS2R8Q9NYW2 309 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 ANXA10Q9UJ72 324 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 ELF5Q9UKW6 265 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-208ENST00000397204 SPATA2Q9UM82 520 aa6.48□□□□□ -1.37
CAPN3-208ENST00000397204 OR4C46A6NHA9 309 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 CGB1A6NKQ9 187 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 PRSS47A8MTI9 375 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 K7EMT4 169 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 RBFOX2O43251 390 aaKnown RBP eCLIP6.47□□□□□ -1.371e-6■■■■■ 32.4
CAPN3-208ENST00000397204 TGOLN2O43493 480 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 SCGNO76038 276 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 REG1AP05451 166 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 MYL9P24844 172 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 GPR183P32249 361 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 CMC4P56277 68 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-208ENST00000397204 OR10A3P58181 314 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 SPSB3Q6PJ21 355 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 HSD17B13Q7Z5P4 300 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-208ENST00000397204 ARL6IP6Q8N6S5 226 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 ZBTB34Q8NCN2 500 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 PHLDA1Q8WV24 401 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-208ENST00000397204 COMMD5Q9GZQ3 224 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 C6orf62Q9GZU0 229 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-208ENST00000397204 MAP6D1Q9H9H5 199 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 HRASLSQ9HDD0 168 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 DAZ1Q9NQZ3 744 aaKnown RBP6.47□□□□□ -1.37
CAPN3-208ENST00000397204 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
CAPN3-208ENST00000397204 IGHV3-35A0A0C4DH35 117 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 TRDV1A0A1B0GX56 115 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 IGLC7A0M8Q6 106 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 NDUFA4O00483 81 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 UPK2O00526 184 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 TAS2R31P59538 309 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 POU2AF1Q16633 256 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 ODF3L2Q3SX64 289 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 TIMM50Q3ZCQ8 353 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 THOC7Q6I9Y2 204 aaKnown RBP6.46□□□□□ -1.38
CAPN3-208ENST00000397204 SPAG16Q8N0X2 631 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 CD300LFQ8TDQ1 290 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 GATAD1Q8WUU5 269 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 TMEM190Q8WZ59 177 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 BSCL2Q96G97 398 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-208ENST00000397204 CSTL1Q9H114 145 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 UBQLN2Q9UHD9 624 aa6.46□□□□□ -1.38
CAPN3-208ENST00000397204 HECTD4Q9Y4D8 3996 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 TMEM235A6NFC5 223 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 MPTX1A8MV57 137 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 SSX5O60225 188 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 DEDDO75618 318 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 HPRT1P00492 218 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 IFNA4P05014 189 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 SERPINE2P07093 398 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 TRAPPC2P0DI81 140 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 TRAPPC2BP0DI82 140 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 NQO2P16083 231 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 RPL35AP18077 110 aaKnown RBP6.45□□□□□ -1.38
CAPN3-208ENST00000397204 TCTAP57738 103 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 GNG2P59768 71 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 SLC25A24Q6NUK1 477 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 ZNF367Q7RTV3 350 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 NUDCD2Q8WVJ2 157 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 QTRT1Q9BXR0 403 aaKnown RBP6.45□□□□□ -1.38
CAPN3-208ENST00000397204 MFFQ9GZY8 342 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 PLEKHA2Q9HB19 425 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 CCL28Q9NRJ3 127 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 NDUFB11Q9NX14 153 aa6.45□□□□□ -1.38
CAPN3-208ENST00000397204 TRAV3A0A0B4J244 114 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 TEX50A0A1B0GTY4 177 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 OR2T8A6NH00 312 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 C15orf62A8K5M9 175 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 SULT1C2O00338 296 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 RPA2P15927 270 aa6.44□□□□□ -1.38
CAPN3-208ENST00000397204 FCGR2CP31995 323 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms