RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CT45A3Q8NHU0 189 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 RSG1Q9BU20 258 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 CLEC7AQ9BXN2 247 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 OR2D2Q9H210 308 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 IFI27L2Q9H2X8 130 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 RPRMQ9NS64 109 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 FAM90A26D6RGX4 464 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 J3QR06 171 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 SLC31A2O15432 143 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 IGHV3-7P01780 117 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 IAPPP10997 89 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 GNG10P50151 68 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 DLX1P56177 255 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 SERF2P84101 59 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 ELOBQ15370 118 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 LRRC75BQ2VPJ9 315 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 NCR3LG1Q68D85 454 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 HCP5Q6MZN7 132 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 OR11H6Q8NGC7 330 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 TCTEX1D2Q8WW35 142 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 C5orf30Q96GV9 206 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 FLNBO75369 2602 aaKnown RBP12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF727A8MUV8 499 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 B4DEV8 164 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 ST8SIA5O15466 376 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 TGFAP01135 160 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 METTL15P1P0C7V9 234 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 BCL2P10415 239 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 HOXB4P17483 251 aaPredicted RBP12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 CYB5R2Q6BCY4 276 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 BEND2Q8NDZ0 799 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 PCGF1Q9BSM1 259 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 GAB2Q9UQC2 676 aa12.02□□□□□ -0.48
TM9SF1-202ENST00000396854 J3QLI3 93 aa12.02□□□□□ -0.49
TM9SF1-202ENST00000396854 IGLV1-47P01700 117 aa12.02□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF726P1Q15940 193 aa12.02□□□□□ -0.49
TM9SF1-202ENST00000396854 FAM90A2PQ658T7 463 aa12.02□□□□□ -0.49
TM9SF1-202ENST00000396854 Q8WTZ3 238 aa12.02□□□□□ -0.49
TM9SF1-202ENST00000396854 GNG13Q9P2W3 67 aa12.02□□□□□ -0.49
TM9SF1-202ENST00000396854 ODF3BA8MYP8 253 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 CLN5O75503 358 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF16P17020 682 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 COX7A1P24310 79 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 RPS10P46783 165 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 PNKDQ8N490 385 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 MMP24Q9Y5R2 645 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 FLNAP21333 2647 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 SMAD7O15105 426 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF137PP52743 207 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 PRRX1P54821 245 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 PRB3Q04118 309 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 PNRC1Q12796 327 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 KLRD1Q13241 179 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 HLA-DRB5Q30154 266 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 LILRB2Q8N423 598 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 TCTEX1D1Q8N7M0 179 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 PINX1Q96BK5 328 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 RCC1LQ96I51 464 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 P2RX4Q99571 388 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 VSIRQ9H7M9 311 aa12.01□□□□□ -0.49
TM9SF1-202ENST00000396854 CXCL1P09341 107 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 CATR1Q13166 79 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 PMS2P11Q13670 270 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 KIAA0141Q14154 515 aaPredicted RBP12□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF343Q6P1L6 599 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNF66Q6ZN08 573 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 SSX7Q7RTT5 188 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 OR4P4Q8NGL7 312 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 TMPRSS5Q9H3S3 457 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 ZANQ9Y493 2812 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 OTOGQ6ZRI0 2925 aa12□□□□□ -0.49
TM9SF1-202ENST00000396854 ABCA1O95477 2261 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 RAB29O14966 203 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 P0C879 139 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 HOXA5P20719 270 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 GPR12P47775 334 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 UBE2E1P51965 193 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 RAB11AP62491 216 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 TMEM14EPQ6UXP3 125 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 SPNS3Q6ZMD2 512 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 LYG1Q8N1E2 194 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 TMEM242Q9NWH2 141 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 TIMM9Q9Y5J7 89 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 NOTCH2Q04721 2471 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 SAA2-SAA4A0A096LPE2 208 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 ZFP92A6NM28 416 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 FABP1P07148 127 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 SAA2P0DJI9 122 aaPredicted RBP11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 TNFRSF9Q07011 255 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 SPANXN5Q5MJ07 72 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 FAM71F2Q6NXP2 309 aa11.99□□□□□ -0.49
TM9SF1-202ENST00000396854 LCN15Q6UWW0 184 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms