RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 NABP2Q9BQ15 211 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 TUBA4BQ9H853 241 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 GNG13Q9P2W3 67 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 OPN1MWP04001 364 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 SNRPCP09234 159 aaKnown RBP9.87□□□□□ -0.83
ITGB1-202ENST00000396033 OPN1MW2P0DN77 364 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 OPN1MW3P0DN78 364 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 IL3RAP26951 378 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 TGIF2LXQ8IUE1 241 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 C11orf42Q8N5U0 333 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 TMEM170AQ8WVE7 144 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 MBD3L1Q8WWY6 194 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 FLYWCH2Q96CP2 140 aaKnown RBP9.87□□□□□ -0.83
ITGB1-202ENST00000396033 TIMD4Q96H15 378 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 PLEKHA3Q9HB20 300 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 BET1LQ9NYM9 111 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 SPTBN1Q01082 2364 aaKnown RBP9.87□□□□□ -0.83
ITGB1-202ENST00000396033 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 IGKV1D-33P01593 117 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 IGKV1-33P01594 117 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 IL6RP08887 468 aaPredicted RBP9.87□□□□□ -0.83
ITGB1-202ENST00000396033 NPY1RP25929 384 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 TMEM8BA6NDV4 472 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 KBTBD11O94819 623 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 MBP02144 154 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 ICAM4Q14773 271 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 PDPNQ86YL7 162 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 ITLN2Q8WWU7 325 aaPredicted RBP9.87□□□□□ -0.83
ITGB1-202ENST00000396033 ST6GALNAC6Q969X2 333 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 WDR83OSQ9Y284 106 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF257Q9Y2Q1 563 aa9.87□□□□□ -0.83
ITGB1-202ENST00000396033 PPIAL4CA0A0B4J2A2 164 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 PHOX2AO14813 284 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 PPIAL4GP0DN37 164 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 MDKP21741 143 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF137PP52743 207 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 CEBPGP53567 150 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 DLX1P56177 255 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 PRCDQ00LT1 54 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 TMEM177Q53S58 311 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 RPP25LQ8N5L8 163 aaKnown RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 RAB1CQ92928 201 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 LHX4Q969G2 390 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 SLC25A22Q9H936 323 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 SLC39A9Q9NUM3 307 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 DOK5Q9P104 306 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 HRNRQ86YZ3 2850 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 ZFP92A6NM28 416 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 PRB3Q04118 309 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 SOHLH1Q5JUK2 328 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 OR10G4Q8NGN3 311 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 OR10G9Q8NGN4 311 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 OR10G7Q8NGN6 311 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 OR4C13Q8NGP0 309 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 NEU4Q8WWR8 484 aaPredicted RBP9.86□□□□□ -0.83
ITGB1-202ENST00000396033 FKBP11Q9NYL4 201 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 WASHC3Q9Y3C0 194 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 MALRD1Q5VYJ5 2156 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 IGHV2-26A0A0B4J1V2 119 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 PRO1933Q9H354 126 aa9.86□□□□□ -0.83
ITGB1-202ENST00000396033 LOC102723971A0A1B0GUV8 181 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 M0R036 132 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 CA2P00918 260 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HSPB1P04792 205 aaKnown RBP9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H1BP16401 226 aaKnown RBP9.85□□□□□ -0.83
ITGB1-202ENST00000396033 CDX1P47902 265 aaPredicted RBP9.85□□□□□ -0.83
ITGB1-202ENST00000396033 DLK1P80370 383 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 SRP19P09132 144 aaKnown RBP9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BCP62807 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST2H2BEQ16778 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 KHDC3LQ587J8 217 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 PDZD11Q5EBL8 140 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.85□□□□□ -0.83
ITGB1-202ENST00000396033 DTX2Q86UW9 622 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 C1QL4Q86Z23 238 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BHQ93079 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BNQ99877 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HIST1H2BMQ99879 126 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 PCGF1Q9BSM1 259 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 HMGB3O15347 200 aaKnown RBP9.85□□□□□ -0.83
ITGB1-202ENST00000396033 BCL2P10415 239 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 PLA2G5P39877 138 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 DEFA6Q01524 100 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 TREML4Q6UXN2 200 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 TNFRSF14Q92956 283 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 GPR61Q9BZJ8 451 aa9.85□□□□□ -0.83
ITGB1-202ENST00000396033 UNKLQ9H9P5 680 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 258.2 ms