RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 P0DMU3 169 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 CBX5P45973 191 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 CLDN12P56749 244 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 FAM209BQ5JX69 171 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 PDPNQ86YL7 162 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 ENKURQ8TC29 256 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 Q96M66 194 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 BANF2Q9H503 90 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 MTFP1Q9UDX5 166 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 TBC1D24Q9ULP9 559 aa9.94□□□□□ -0.82
VCPKMT-201ENST00000395859 PDCD6O75340 191 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 ADMP35318 185 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 RPS27AP62979 156 aaKnown RBP9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 RBMY1FQ15415 496 aaKnown RBP9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 PLET1Q6UQ28 207 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 Q8NAQ8 132 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 DRAXINQ8NBI3 349 aaPredicted RBP9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 NECAP1Q8NC96 275 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 CHAC2Q8WUX2 184 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 GALMQ96C23 342 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 CCDC140Q96MF4 163 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 CSTL1Q9H114 145 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 AUNIPQ9H7T9 357 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 HSF4Q9ULV5 492 aa9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 MRPS7Q9Y2R9 242 aaKnown RBP9.93□□□□□ -0.82
VCPKMT-201ENST00000395859 TRAV10A0A0B4J240 114 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 FAM240BA0A1B0GVZ2 78 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 ANKRD20A5PA0PJZ0 165 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 RAB27BO00194 218 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 TSPAN4O14817 238 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 PLA2G10O15496 165 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 CD74P04233 296 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 SCTP09683 121 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 Q6ZRM9 215 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 Q6ZTC4 211 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 SLC38A6Q8IZM9 456 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 OR10R2Q8NGX6 335 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 GPX8Q8TED1 209 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 NEDD4LQ96PU5 975 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 C5orf66Q9H5L9 145 aa9.92□□□□□ -0.82
VCPKMT-201ENST00000395859 TRAV18A0A075B6X5 111 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 UBE2QL1A1L167 161 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 SRRM4A7MD48 611 aaKnown RBP9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 MPTX1A8MV57 137 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 TRAPPC2P0DI81 140 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 TRAPPC2BP0DI82 140 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 HLA-DMBP28068 263 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 TAS2R19P59542 299 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 UNC119Q13432 240 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 KLF9Q13886 244 aaPredicted RBP9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 MEF2DQ14814 521 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 UNQ9165/PRO28630Q6UXU0 137 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 RBPMS2Q6ZRY4 209 aaKnown RBP9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 NRARPQ7Z6K4 114 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 MARVELD1Q9BSK0 173 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 C11orf54Q9H0W9 315 aaPredicted RBP9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 LPAR5Q9H1C0 372 aa9.91□□□□□ -0.82
VCPKMT-201ENST00000395859 OR2J3O76001 311 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 RBMY1A1P0DJD3 496 aaKnown RBP9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 RBMY1CP0DJD4 496 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 RCVRNP35243 200 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 RFX2P48378 723 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 TNP2Q05952 138 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 KLK9Q2XQG4 91 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 OR4A47Q6IF82 309 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 SNX29P2Q8IUI4 249 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 TMEM229BQ8NBD8 167 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 SRSF12Q8WXF0 261 aaKnown RBP9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 RAB3CQ96E17 227 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 MRPL27Q9P0M9 148 aaKnown RBP9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 KLK9Q9UKQ9 250 aa9.9□□□□□ -0.82
VCPKMT-201ENST00000395859 AGRNO00468 2067 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 PFDN1O60925 122 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 DHFRP00374 187 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 AKAIN1P0CW23 69 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 BCAP31P51572 246 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 FAM106AQ4KMX7 169 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 SOHLH1Q5JUK2 328 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 ZNF880Q6PDB4 577 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 OR52I2Q8NH67 350 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 CD300LFQ8TDQ1 290 aa9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
VCPKMT-201ENST00000395859 NACAE9PAV3 2078 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 IGLV2-18A0A075B6J9 118 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 ZNF320A2RRD8 509 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 FOXI3A8MTJ6 420 aaPredicted RBP9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 PRAF2O60831 178 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 CD3GP09693 182 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 INAFM2P0DMQ5 153 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 HIST1H1DP16402 221 aaKnown RBP9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 NAT1P18440 290 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 ARL3P36405 182 aa9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
VCPKMT-201ENST00000395859 ZNF124Q15973 351 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms