RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 PSMG3Q9BT73 122 aaPredicted RBP14.65□□□□□ -0.06
SREBF1-204ENST00000395756 ZNF705GA8MUZ8 300 aaPredicted RBP14.65□□□□□ -0.06
SREBF1-204ENST00000395756 RAB39BQ96DA2 213 aa14.65□□□□□ -0.06
SREBF1-204ENST00000395756 SLC35D1Q9NTN3 355 aa14.65□□□□□ -0.06
SREBF1-204ENST00000395756 ZNF664Q8N3J9 261 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 ZNF439Q8NDP4 499 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 OR13D1Q8NGV5 346 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 SSMEM1Q8WWF3 244 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 PPP1R2P9O14990 202 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 RAB24Q969Q5 203 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 MRPL20Q9BYC9 149 aaKnown RBP14.64□□□□□ -0.07
SREBF1-204ENST00000395756 MS4A5Q9H3V2 200 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 RAB9BQ9NP90 201 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 LINC00312Q9Y6C7 94 aa14.64□□□□□ -0.07
SREBF1-204ENST00000395756 IGHV3-72A0A0B4J1Y9 119 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 THBS3P49746 956 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 LRRC10Q5BKY1 277 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 ZNF506Q5JVG8 444 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 OR10X1Q8NGY0 326 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 DIRC2Q96SL1 478 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 PARD6GQ9BYG4 376 aaPredicted RBP14.63□□□□□ -0.07
SREBF1-204ENST00000395756 IGHV1-69-2A0A0G2JMI3 117 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 TCF21O43680 179 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 C1QTNF9P0C862 333 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 BCL2P10415 239 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 APOBEC3AP31941 199 aaPredicted RBP14.63□□□□□ -0.07
SREBF1-204ENST00000395756 DLK1P80370 383 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 LOC102723971A0A1B0GUV8 181 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 HNF1AP20823 631 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 SLC25A48Q6ZT89 311 aaKnown RBP14.63□□□□□ -0.07
SREBF1-204ENST00000395756 TMEM170AQ8WVE7 144 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 NIPSNAP3BQ9BS92 247 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 GAL3ST2Q9H3Q3 398 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 ENY2Q9NPA8 101 aa14.63□□□□□ -0.07
SREBF1-204ENST00000395756 ATP6V1FQ16864 119 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 DPPA3Q6W0C5 159 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 MUC15Q8N387 334 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 SEC14L6B5MCN3 397 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 PLXNB1O43157 2135 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 SIAH2O43255 324 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 ABCA1O95477 2261 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 ZNF343Q6P1L6 599 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 OR51B2Q9Y5P1 312 aa14.62□□□□□ -0.07
SREBF1-204ENST00000395756 HSPB1P04792 205 aaKnown RBP14.61□□□□□ -0.07
SREBF1-204ENST00000395756 CA7P43166 264 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 VDAC2P45880 294 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-204ENST00000395756 UBE2G2P60604 165 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 GNB2P62879 340 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 MOB3BQ86TA1 216 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 CBLN4Q9NTU7 201 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 RBFOX2O43251 390 aaKnown RBP eCLIP14.61□□□□□ -0.076e-7■■■■■ 28.9
SREBF1-204ENST00000395756 OR2C1O95371 312 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 CHRNB4P30926 498 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 KLRB1Q12918 225 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 MLANAQ16655 118 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 MIC13Q5XKP0 118 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 SP5Q6BEB4 398 aaPredicted RBP14.61□□□□□ -0.07
SREBF1-204ENST00000395756 OR10W1Q8NGF6 305 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 RPUSD4Q96CM3 377 aaKnown RBP14.61□□□□□ -0.07
SREBF1-204ENST00000395756 ITPR1Q14643 2758 aa14.61□□□□□ -0.07
SREBF1-204ENST00000395756 C15orf61A6NNL5 157 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 J3QR06 171 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 DSCAML1Q8TD84 2053 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 A0A1B0GW64 132 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 CA2P00918 260 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 HRASP01112 189 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 RTL8BQ17RB0 113 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 PDLIM3Q53GG5 364 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-204ENST00000395756 ARSJQ5FYB0 599 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-204ENST00000395756 OR5T1Q8NG75 326 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 TMEM204Q9BSN7 226 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 TET2Q6N021 2002 aaPredicted RBP14.6□□□□□ -0.07
SREBF1-204ENST00000395756 ENSAO43768 121 aaKnown RBP14.6□□□□□ -0.07
SREBF1-204ENST00000395756 KIR2DS2P43631 304 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 HSPE1P61604 102 aaKnown RBP14.6□□□□□ -0.07
SREBF1-204ENST00000395756 TREML4Q6UXN2 200 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 CORO2AQ92828 525 aa14.6□□□□□ -0.07
SREBF1-204ENST00000395756 HEPN1Q6WQI6 88 aa14.59□□□□□ -0.07
SREBF1-204ENST00000395756 RNASE8Q8TDE3 154 aaKnown RBP14.59□□□□□ -0.07
SREBF1-204ENST00000395756 PACRGQ96M98 296 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-204ENST00000395756 HARBI1Q96MB7 349 aa14.59□□□□□ -0.07
SREBF1-204ENST00000395756 IGHV3-48P01763 117 aa14.59□□□□□ -0.07
SREBF1-204ENST00000395756 SAA1P0DJI8 122 aaPredicted RBP14.59□□□□□ -0.07
SREBF1-204ENST00000395756 APELAP0DMC3 54 aa14.59□□□□□ -0.07
SREBF1-204ENST00000395756 HIST3H2BBQ8N257 126 aa14.59□□□□□ -0.07
SREBF1-204ENST00000395756 SLC24A4Q8NFF2 622 aa14.59□□□□□ -0.07
SREBF1-204ENST00000395756 MAP1AP78559 2803 aaPredicted RBP14.58□□□□□ -0.07
SREBF1-204ENST00000395756 TRAV1-1A0A0B4J248 108 aa14.58□□□□□ -0.07
SREBF1-204ENST00000395756 NPY1RP25929 384 aa14.58□□□□□ -0.07
SREBF1-204ENST00000395756 LOXP28300 417 aaPredicted RBP14.58□□□□□ -0.07
SREBF1-204ENST00000395756 C4orf17Q53FE4 359 aa14.58□□□□□ -0.07
SREBF1-204ENST00000395756 OR4F5Q8NH21 305 aa14.58□□□□□ -0.07
SREBF1-204ENST00000395756 OR4F4Q96R69 305 aa14.58□□□□□ -0.07
SREBF1-204ENST00000395756 ACTR3CQ9C0K3 210 aaPredicted RBP14.58□□□□□ -0.07
SREBF1-204ENST00000395756 HIVEP3Q5T1R4 2406 aa14.58□□□□□ -0.08
SREBF1-204ENST00000395756 C17orf112F2Z3M2 114 aa14.58□□□□□ -0.08
SREBF1-204ENST00000395756 M0R143 59 aa14.58□□□□□ -0.08
SREBF1-204ENST00000395756 PAGE4O60829 102 aa14.58□□□□□ -0.08
SREBF1-204ENST00000395756 ADORA2A-AS1P86434 159 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms