RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 MMD2Q8IY49 270 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 HARBI1Q96MB7 349 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 BBC3Q96PG8 261 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 RSG1Q9BU20 258 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 SMCO3A2RU48 225 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 CEBPZOSA8MTT3 80 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 CA2P00918 260 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 RAB2AP61019 212 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 TMEM217Q8N7C4 229 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 H1FXQ92522 213 aaKnown RBP11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 ZNF430Q9H8G1 570 aaPredicted RBP11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 MANBALQ9NQG1 85 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 RFNGQ9Y644 331 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 TLN1Q9Y490 2541 aaKnown RBP11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 PLCE1Q9P212 2302 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 VENTXO95231 258 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 AREGP15514 252 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 HRH4Q9H3N8 390 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 DPM3Q9P2X0 92 aa11.36□□□□□ -0.59
CDC42SE2-202ENST00000395246 RITA1Q96K30 269 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 E7EUB6 86 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 H3BP45 60 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 SNAPINO95295 136 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 CEACAM3P40198 252 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 PSMB3P49720 205 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 WT1-ASQ06250 92 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 TMEM116Q8NCL8 245 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 NKX6-2Q9C056 277 aaPredicted RBP11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 PLEKHA3Q9HB20 300 aa11.35□□□□□ -0.59
CDC42SE2-202ENST00000395246 STAG3L2P0CL84 134 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 STAG3L3P0CL85 134 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 RHEBQ15382 184 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 ACACAQ13085 2346 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 TMEM250H0YL14 139 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 BCL2P10415 239 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 LRRC75A-AS1Q8N1F1 130 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 OR1P1Q8NH06 330 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 INSIG2Q9Y5U4 225 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 RELNP78509 3460 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 CORTO00230 105 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 RNF224P0DH78 156 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 PDLIM4P50479 330 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 MALSU1Q96EH3 234 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 FBXO7Q9Y3I1 522 aa11.34□□□□□ -0.59
CDC42SE2-202ENST00000395246 CADP27708 2225 aa11.33□□□□□ -0.59
CDC42SE2-202ENST00000395246 UBE2L5PA0A1B0GUS4 154 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 NXPH3O95157 252 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 OR5G3P0C626 314 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 FGF7P21781 194 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 FAM74A3Q4VXF1 159 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 FAM90A2PQ658T7 463 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 TEPPQ6URK8 271 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 ATRAIDQ6UW56 229 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 SLC35E3Q7Z769 313 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 CCDC144NLQ6NUI1 221 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 FAM213BQ8TBF2 198 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 IFNA17P01571 189 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 HTR1DP28221 377 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 OR1L6Q8NGR2 347 aa11.33□□□□□ -0.6
CDC42SE2-202ENST00000395246 IGKV1OR2-108A0A075B7D4 117 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 VAX2Q9UIW0 290 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 DMRT1Q9Y5R6 373 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 B4DEV8 164 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 FOXH1O75593 365 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 GAMTQ14353 236 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 C11orf52Q96A22 123 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 MBD6Q96DN6 1003 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 ACTR3CQ9C0K3 210 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 VMO1Q7Z5L0 202 aa11.32□□□□□ -0.6
CDC42SE2-202ENST00000395246 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
CDC42SE2-202ENST00000395246 RNF2Q99496 336 aa11.31□□□□□ -0.6
CDC42SE2-202ENST00000395246 TRGV9Q99603 122 aa11.31□□□□□ -0.6
CDC42SE2-202ENST00000395246 MRPL32Q9BYC8 188 aaKnown RBP11.31□□□□□ -0.6
CDC42SE2-202ENST00000395246 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE2-202ENST00000395246 F11RQ9Y624 299 aaKnown RBP11.31□□□□□ -0.6
CDC42SE2-202ENST00000395246 CXorf65A6NEN9 183 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 MOSP00540 346 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 MFAP2P55001 183 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 PIEZO1Q92508 2521 aa11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 KMT2BQ9UMN6 2715 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE2-202ENST00000395246 AGPAT2O15120 278 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms