RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 RPUSD1Q9UJJ7 312 aaKnown RBP13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 ACANP16112 2415 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 LYL1P12980 280 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 RPP25LQ8N5L8 163 aaKnown RBP13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 OR2T6Q8NHC8 308 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 PTPRBP23467 1997 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 MOSP00540 346 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 NUDT19A8MXV4 375 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 KBTBD11O94819 623 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 MT-CO2P00403 227 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 TMEM11P17152 192 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 LRRC75BQ2VPJ9 315 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 C1orf229Q6ZS94 237 aaPredicted RBP13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 UHRF2Q96PU4 802 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 KIAA1456Q9P272 454 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 CTSZQ9UBR2 303 aa13.04□□□□□ -0.32
SMARCD1-202ENST00000394963 S100A2P29034 98 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 NCMAPQ5T1S8 102 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 TEPPQ6URK8 271 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 LINC00312Q9Y6C7 94 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 SORL1Q92673 2214 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 H7BYZ3 331 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 NDUFB4O95168 129 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 BCL2P10415 239 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 S100PP25815 95 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 PRRX1P54821 245 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 LOXL3P58215 753 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 SRSF7Q16629 238 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 OR1B1Q8NGR6 318 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 NPIPB3Q92617 1050 aa13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 GSX1Q9H4S2 264 aaPredicted RBP13.03□□□□□ -0.32
SMARCD1-202ENST00000394963 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.32
SMARCD1-202ENST00000394963 SRRM4A7MD48 611 aaKnown RBP13.02□□□□□ -0.32
SMARCD1-202ENST00000394963 CNTFRP26992 372 aa13.02□□□□□ -0.32
SMARCD1-202ENST00000394963 SLC35B1P78383 322 aa13.02□□□□□ -0.32
SMARCD1-202ENST00000394963 ARSJQ5FYB0 599 aaPredicted RBP13.02□□□□□ -0.32
SMARCD1-202ENST00000394963 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.32
SMARCD1-202ENST00000394963 SHISA9B4DS77 424 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 IGHV3-23P01764 117 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 ARL14EPLP0DKL9 152 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 CT45A6P0DMU7 189 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 CT45A5P0DMU8 189 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 CT45A7P0DMV0 189 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 SLC35E3Q7Z769 313 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 OR9G1Q8NH87 305 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 DIRC2Q96SL1 478 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 IFT22Q9H7X7 185 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 SOD3P08294 240 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 NHLRC2Q8NBF2 726 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 PRNDQ9UKY0 176 aa13.02□□□□□ -0.33
SMARCD1-202ENST00000394963 RND2P52198 227 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 SSX7Q7RTT5 188 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 OR1L8Q8NGR8 309 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 EAF1Q96JC9 268 aaPredicted RBP13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 NPVFQ9HCQ7 196 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 COX7A2P2O60397 106 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 ATP5G3P48201 142 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 TPSG1Q9NRR2 321 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 IGKV1D-33P01593 117 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 IGKV1-33P01594 117 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 GNB4Q9HAV0 340 aa13.01□□□□□ -0.33
SMARCD1-202ENST00000394963 TCL1AP56279 114 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 KLF17Q5JT82 389 aaPredicted RBP13□□□□□ -0.33
SMARCD1-202ENST00000394963 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 SH2D7A6NKC9 451 aaPredicted RBP13□□□□□ -0.33
SMARCD1-202ENST00000394963 SUMO1P63165 101 aaKnown RBP13□□□□□ -0.33
SMARCD1-202ENST00000394963 PRR31Q5SQ13 230 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 SPNS3Q6ZMD2 512 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 VAX2Q9UIW0 290 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 CTXND1A0A1B0GTU2 59 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 MBP02144 154 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 LYZP61626 148 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 SERF2P84101 59 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 MEF2BQ02080 365 aaPredicted RBP13□□□□□ -0.33
SMARCD1-202ENST00000394963 TMEM37Q8WXS4 190 aa13□□□□□ -0.33
SMARCD1-202ENST00000394963 C15orf62A8K5M9 175 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 SUB1P53999 127 aaKnown RBP eCLIP12.99□□□□□ -0.334e-6■■■■■ 28.5
SMARCD1-202ENST00000394963 ATP6V1FQ16864 119 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 LEMD1Q68G75 181 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 STPG3Q8N7X2 389 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 NUP37Q8NFH4 326 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 WASHC3Q9Y3C0 194 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 JMJD1CQ15652 2540 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 TGIF2-C20orf24A0A0A6YYL0 155 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 KIR2DS2P43631 304 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 RELBQ01201 579 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 TMEM241Q24JQ0 296 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 OR4X1Q8NH49 305 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 Q8TCH9 128 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 FAM90A26D6RGX4 464 aa12.99□□□□□ -0.33
SMARCD1-202ENST00000394963 MT-ND4LP03901 98 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms