RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 HNF4GQ14541 408 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 ZNF266Q14584 549 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 MMDQ15546 238 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 PPP1R27Q86WC6 154 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 HINT2Q9BX68 163 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 FBXL15Q9H469 300 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 HECTD1Q9ULT8 2610 aa16.24■□□□□ 0.19
HDDC3-202ENST00000394272 BORCS7-ASMTA0A0B4J1R7 106 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 INS-IGF2F8WCM5 200 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 J3QLI3 93 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 NBR2O15453 112 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 TGFAP01135 160 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 HTR2BP41595 481 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 HBG1P69891 147 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 HBG2P69892 147 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 HES1Q14469 280 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 KLF17Q5JT82 389 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-202ENST00000394272 C10orf55Q5SWW7 151 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 BRD3OSQ6XYD6 125 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 TMEM170AQ8WVE7 144 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 ATP5SQ99766 215 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 ENY2Q9NPA8 101 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 NAV3Q8IVL0 2385 aa16.23■□□□□ 0.19
HDDC3-202ENST00000394272 RPS10-NUDT3A0A1W2PQS6 291 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 RPP30P78346 268 aaKnown RBP16.22■□□□□ 0.19
HDDC3-202ENST00000394272 WFDC11Q8NEX6 87 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 ITPR3Q14573 2671 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 AKAP9Q99996 3911 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 A0A1B0GW64 132 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 DFFBO76075 338 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 IFNA10P01566 189 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 BRS3P32247 399 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 MAS1LP35410 378 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 OR8G2PQ6IF36 304 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 GINS3Q9BRX5 216 aa16.22■□□□□ 0.19
HDDC3-202ENST00000394272 SSBP2P81877 361 aaPredicted RBP16.21■□□□□ 0.19
HDDC3-202ENST00000394272 SLC38A11Q08AI6 406 aa16.21■□□□□ 0.19
HDDC3-202ENST00000394272 SLC24A4Q8NFF2 622 aa16.21■□□□□ 0.19
HDDC3-202ENST00000394272 OR10W1Q8NGF6 305 aa16.21■□□□□ 0.19
HDDC3-202ENST00000394272 FOXC2Q99958 501 aa16.21■□□□□ 0.19
HDDC3-202ENST00000394272 FAM106CPP0CH98 169 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 COMPP49747 757 aaPredicted RBP16.2■□□□□ 0.18
HDDC3-202ENST00000394272 BSXQ3C1V8 233 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 FAM120AOSQ5T036 256 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 OR10P1Q8NGE3 313 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 TMED6Q8WW62 240 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 MEGF9Q9H1U4 602 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 KIAA1456Q9P272 454 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 A0A1W2PN81 502 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 FCN1O00602 326 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 SCAF4O95104 1147 aaKnown RBP16.2■□□□□ 0.18
HDDC3-202ENST00000394272 CHRNA7P36544 502 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 TNXAQ16473 311 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 CLLU1Q5K131 121 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 FAM74A1Q5RGS3 127 aa16.2■□□□□ 0.18
HDDC3-202ENST00000394272 PINX1Q96BK5 328 aaKnown RBP16.2■□□□□ 0.18
HDDC3-202ENST00000394272 A0A0U1RQK1 487 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 PRSS46E5RG02 174 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 ACTL6BO94805 426 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 OR8U8P0C7N1 319 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 TMEM11P17152 192 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 NPY1RP25929 384 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 PLGLAQ15195 96 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 C5orf64Q2M2E5 130 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 LILRB2Q8N423 598 aa16.19■□□□□ 0.18
HDDC3-202ENST00000394272 CA2P00918 260 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 RPL27AP46776 148 aaKnown RBP16.18■□□□□ 0.18
HDDC3-202ENST00000394272 WT1-ASQ06250 92 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 ATP6V1FQ16864 119 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 EIF5AL1Q6IS14 154 aaKnown RBP16.18■□□□□ 0.18
HDDC3-202ENST00000394272 ETV3LQ6ZN32 361 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 HSD17B11Q8NBQ5 300 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 ATP6V1G1O75348 118 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 FBXO24O75426 580 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 NMBP08949 121 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 SPP1P10451 314 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 ATP5IP56385 69 aaPredicted RBP16.18■□□□□ 0.18
HDDC3-202ENST00000394272 RAB11AP62491 216 aa16.18■□□□□ 0.18
HDDC3-202ENST00000394272 ERHP84090 104 aaKnown RBP16.18■□□□□ 0.18
HDDC3-202ENST00000394272 PCNPQ8WW12 178 aaKnown RBP16.18■□□□□ 0.18
HDDC3-202ENST00000394272 SEC11BP0C7V7 166 aa16.17■□□□□ 0.18
HDDC3-202ENST00000394272 RNASE2P10153 161 aaKnown RBP16.17■□□□□ 0.18
HDDC3-202ENST00000394272 VWC2Q2TAL6 325 aa16.17■□□□□ 0.18
HDDC3-202ENST00000394272 C2orf83Q53S99 150 aa16.17■□□□□ 0.18
HDDC3-202ENST00000394272 SLC25A32Q9H2D1 315 aa16.17■□□□□ 0.18
HDDC3-202ENST00000394272 IGLC7A0M8Q6 106 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 IFNA5P01569 189 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 ATP6V0CP27449 155 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 RAB14P61106 215 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 GNB1P62873 340 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 CIARTQ8N365 385 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-202ENST00000394272 TMEM147Q9BVK8 224 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 PARD6GQ9BYG4 376 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-202ENST00000394272 SH3BGRL3Q9H299 93 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 PLA2G2EQ9NZK7 142 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 SOX21Q9Y651 276 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-202ENST00000394272 IFNA4P05014 189 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 FAM157CP0CG43 387 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 NDUFA5Q16718 116 aa16.16■□□□□ 0.18
HDDC3-202ENST00000394272 CYB5R2Q6BCY4 276 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms