RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MBD3L4A6NDZ8 208 aaPredicted RBP15.45■□□□□ 0.06
CBX1-202ENST00000393408 MBD3L3A6NE82 208 aaPredicted RBP15.45■□□□□ 0.06
CBX1-202ENST00000393408 MBD3L5A6NJ08 208 aaPredicted RBP15.45■□□□□ 0.06
CBX1-202ENST00000393408 GLRXP35754 106 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 SELENOTP62341 195 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 ZNF90Q03938 601 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 DUX4L9Q6RFH8 374 aaPredicted RBP15.45■□□□□ 0.06
CBX1-202ENST00000393408 LYG1Q8N1E2 194 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 MBD3L2Q8NHZ7 208 aaPredicted RBP15.45■□□□□ 0.06
CBX1-202ENST00000393408 ADTRPQ96IZ2 230 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 UHRF2Q96PU4 802 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 OR51B2Q9Y5P1 312 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 SLC17A3O00476 420 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 AREGP15514 252 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 EAF1Q96JC9 268 aaPredicted RBP15.45■□□□□ 0.06
CBX1-202ENST00000393408 SFXN3Q9BWM7 321 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 TP53TG5Q9Y2B4 290 aa15.45■□□□□ 0.06
CBX1-202ENST00000393408 SCGB1D1O95968 90 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 CBLN1P23435 193 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 MIR17HGQ75NE6 70 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 SLC25A10Q9UBX3 287 aaPredicted RBP15.44■□□□□ 0.06
CBX1-202ENST00000393408 RAI1Q7Z5J4 1906 aaPredicted RBP15.44■□□□□ 0.06
CBX1-202ENST00000393408 VHLLQ6RSH7 139 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 DMRTC2Q8IXT2 367 aaPredicted RBP15.44■□□□□ 0.06
CBX1-202ENST00000393408 ZCCHC14Q8WYQ9 949 aaKnown RBP15.44■□□□□ 0.06
CBX1-202ENST00000393408 CORO2AQ92828 525 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 MS4A10Q96PG2 267 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 HINT2Q9BX68 163 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 TP53TG3Q9ULZ0 132 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 SLC45A2Q9UMX9 530 aa15.44■□□□□ 0.06
CBX1-202ENST00000393408 IGLV3-9A0A075B6K5 115 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 GRIFINA4D1Z8 144 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 GATA4P43694 442 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 LGALS4P56470 323 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 TIMM23BQ5SRD1 257 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 ASCL3Q9NQ33 180 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 NAGKQ9UJ70 344 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 PRNDQ9UKY0 176 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 ARL2-SNX15V9GYD0 113 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 BDP1A6H8Y1 2624 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 CADP27708 2225 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 STUMQ69YW2 141 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 ZNF474Q6S9Z5 364 aaPredicted RBP15.43■□□□□ 0.06
CBX1-202ENST00000393408 CMTM2Q8TAZ6 248 aa15.43■□□□□ 0.06
CBX1-202ENST00000393408 POLR3KQ9Y2Y1 108 aaPredicted RBP15.43■□□□□ 0.06
CBX1-202ENST00000393408 SPENQ96T58 3664 aaKnown RBP15.42■□□□□ 0.06
CBX1-202ENST00000393408 ACTL6BO94805 426 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 PRCDQ00LT1 54 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 RNF7Q9UBF6 113 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 ZNF257Q9Y2Q1 563 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 A8MXE2 369 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 J3QR06 171 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 GNG10P50151 68 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 LINC00310P59036 64 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 USF2Q15853 346 aaPredicted RBP15.42■□□□□ 0.06
CBX1-202ENST00000393408 C1orf194Q5T5A4 169 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 FAM122AQ96E09 287 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 NABP2Q9BQ15 211 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 MRPL18Q9H0U6 180 aaKnown RBP15.42■□□□□ 0.06
CBX1-202ENST00000393408 PLEKHA3Q9HB20 300 aa15.42■□□□□ 0.06
CBX1-202ENST00000393408 UPK2O00526 184 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 GAFA1Q96PS6 74 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 GCM1Q9NP62 436 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 V9GYV3 84 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 OR10J1P30954 320 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 PSG5Q15238 335 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 MOB3BQ86TA1 216 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 OR1L6Q8NGR2 347 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 LRFN3Q9BTN0 628 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 LINC00574Q9H8X3 128 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 TMEM167BQ9NRX6 74 aa15.41■□□□□ 0.06
CBX1-202ENST00000393408 IGKV1OR2-108A0A075B7D4 117 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 KIR2DL5BA0A0G2JN68 375 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 KIR2DL5BA0A0G2JPC4 375 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 EREGO14944 169 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 MMP23AO75900 390 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 ESDP10768 282 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 RPEL1Q2QD12 228 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 C3orf36Q3SXR2 165 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 PIP4P1Q86T03 277 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 MMD2Q8IY49 270 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 KIR2DL5AQ8N109 375 aa15.4■□□□□ 0.06
CBX1-202ENST00000393408 CT45A6P0DMU7 189 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 CT45A5P0DMU8 189 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 CT45A7P0DMV0 189 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 ERVFC1-1P60608 527 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 OR5I1Q13606 314 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 DEFB109BQ30KR1 87 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 KRTCAP3Q53RY4 240 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 CENPWQ5EE01 88 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 ZNF503Q96F45 646 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 SRRM4A7MD48 611 aaKnown RBP15.39■□□□□ 0.05
CBX1-202ENST00000393408 IGKV1-16P04430 117 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 CRISP2P16562 243 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 DEFB108BQ8NET1 73 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 SLC35E1Q96K37 410 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 TECRQ9NZ01 308 aaKnown RBP15.39■□□□□ 0.05
CBX1-202ENST00000393408 SVILO95425 2214 aa15.39■□□□□ 0.05
CBX1-202ENST00000393408 HELTA6NFD8 242 aa15.38■□□□□ 0.05
CBX1-202ENST00000393408 FRMD6-AS1P0C7T7 363 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms