RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ZNF146Q15072 292 aa8.81□□□□□ -1
CALD1-203ENST00000393118 ST6GALNAC6Q969X2 333 aa8.81□□□□□ -1
CALD1-203ENST00000393118 SAP30LQ9HAJ7 183 aa8.81□□□□□ -1
CALD1-203ENST00000393118 hADV38S2A0JD32 116 aa8.8□□□□□ -1
CALD1-203ENST00000393118 APELAP0DMC3 54 aa8.8□□□□□ -1
CALD1-203ENST00000393118 RNASEKQ6P5S7 137 aaKnown RBP8.8□□□□□ -1
CALD1-203ENST00000393118 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
CALD1-203ENST00000393118 PLA2G2EQ9NZK7 142 aa8.8□□□□□ -1
CALD1-203ENST00000393118 LOC102723971A0A1B0GUV8 181 aa8.8□□□□□ -1
CALD1-203ENST00000393118 MIC13Q5XKP0 118 aa8.8□□□□□ -1
CALD1-203ENST00000393118 CLDND2Q8NHS1 167 aa8.8□□□□□ -1
CALD1-203ENST00000393118 SMIM12Q96EX1 92 aa8.8□□□□□ -1
CALD1-203ENST00000393118 RNF2Q99496 336 aa8.8□□□□□ -1
CALD1-203ENST00000393118 TMEM106BQ9NUM4 274 aa8.8□□□□□ -1
CALD1-203ENST00000393118 TMEM140Q9NV12 185 aa8.8□□□□□ -1
CALD1-203ENST00000393118 C16orf97H3BN30 126 aa8.8□□□□□ -1
CALD1-203ENST00000393118 NDUFB3O43676 98 aa8.8□□□□□ -1
CALD1-203ENST00000393118 CBLN1P23435 193 aa8.8□□□□□ -1
CALD1-203ENST00000393118 NPY1RP25929 384 aa8.8□□□□□ -1
CALD1-203ENST00000393118 PAFAH1B2P68402 229 aa8.8□□□□□ -1
CALD1-203ENST00000393118 LRRC75BQ2VPJ9 315 aa8.8□□□□□ -1
CALD1-203ENST00000393118 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
CALD1-203ENST00000393118 DNLZQ5SXM8 178 aa8.8□□□□□ -1
CALD1-203ENST00000393118 Q6ZSR3 168 aa8.8□□□□□ -1
CALD1-203ENST00000393118 YLPM1P49750 1951 aaKnown RBP8.8□□□□□ -1
CALD1-203ENST00000393118 FAM90A26D6RGX4 464 aa8.8□□□□□ -1
CALD1-203ENST00000393118 ITGB1BP1O14713 200 aa8.8□□□□□ -1
CALD1-203ENST00000393118 RPL31P62899 125 aaKnown RBP8.8□□□□□ -1
CALD1-203ENST00000393118 ARL16Q0P5N6 197 aa8.8□□□□□ -1
CALD1-203ENST00000393118 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
CALD1-203ENST00000393118 TCF23Q7RTU1 214 aa8.8□□□□□ -1
CALD1-203ENST00000393118 MEGF9Q9H1U4 602 aa8.8□□□□□ -1
CALD1-203ENST00000393118 ZNF331Q9NQX6 463 aaPredicted RBP8.8□□□□□ -1
CALD1-203ENST00000393118 FAM90A27PA6NNH2 459 aa8.79□□□□□ -1
CALD1-203ENST00000393118 GNG7O60262 68 aa8.79□□□□□ -1
CALD1-203ENST00000393118 ERHP84090 104 aaKnown RBP8.79□□□□□ -1
CALD1-203ENST00000393118 Q6ZPA2 131 aa8.79□□□□□ -1
CALD1-203ENST00000393118 FAM216BQ8N7L0 139 aa8.79□□□□□ -1
CALD1-203ENST00000393118 SDF2L1Q9HCN8 221 aa8.79□□□□□ -1
CALD1-203ENST00000393118 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
CALD1-203ENST00000393118 Q6ZS49 121 aa8.79□□□□□ -1
CALD1-203ENST00000393118 OR4P4Q8NGL7 312 aa8.79□□□□□ -1
CALD1-203ENST00000393118 TMEM170AQ8WVE7 144 aa8.79□□□□□ -1
CALD1-203ENST00000393118 COQ2Q96H96 371 aa8.79□□□□□ -1
CALD1-203ENST00000393118 FRYLO94915 3013 aa8.79□□□□□ -1
CALD1-203ENST00000393118 GAGE1Q13065 139 aa8.79□□□□□ -1
CALD1-203ENST00000393118 SRSF7Q16629 238 aaKnown RBP eCLIP8.79□□□□□ -1
CALD1-203ENST00000393118 ZNF585BQ52M93 769 aa8.79□□□□□ -1
CALD1-203ENST00000393118 LRRC10Q5BKY1 277 aa8.79□□□□□ -1
CALD1-203ENST00000393118 NIT1Q86X76 327 aa8.79□□□□□ -1
CALD1-203ENST00000393118 J3QR06 171 aa8.78□□□□□ -1
CALD1-203ENST00000393118 TNFSF13O75888 250 aa8.78□□□□□ -1
CALD1-203ENST00000393118 GLRXP35754 106 aa8.78□□□□□ -1
CALD1-203ENST00000393118 GNB2P62879 340 aa8.78□□□□□ -1
CALD1-203ENST00000393118 RPRMLQ8N4K4 120 aa8.78□□□□□ -1
CALD1-203ENST00000393118 SPRY4Q9C004 299 aa8.78□□□□□ -1
CALD1-203ENST00000393118 WDFY4Q6ZS81 3184 aa8.78□□□□□ -1
CALD1-203ENST00000393118 GAGE10A6NGK3 116 aa8.78□□□□□ -1
CALD1-203ENST00000393118 NDUFB4O95168 129 aa8.78□□□□□ -1
CALD1-203ENST00000393118 WT1P19544 449 aaPredicted RBP8.78□□□□□ -1
CALD1-203ENST00000393118 UQCRFS1P47985 274 aa8.78□□□□□ -1
CALD1-203ENST00000393118 TIMM23BQ5SRD1 257 aa8.78□□□□□ -1
CALD1-203ENST00000393118 HARBI1Q96MB7 349 aa8.78□□□□□ -1
CALD1-203ENST00000393118 PXMP4Q9Y6I8 212 aa8.78□□□□□ -1
CALD1-203ENST00000393118 TLN1Q9Y490 2541 aaKnown RBP8.78□□□□□ -1
CALD1-203ENST00000393118 USP34Q70CQ2 3546 aa8.78□□□□□ -1
CALD1-203ENST00000393118 ARHGAP21Q5T5U3 1957 aa8.78□□□□□ -1
CALD1-203ENST00000393118 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
CALD1-203ENST00000393118 IGKV1-39P01597 117 aa8.78□□□□□ -1
CALD1-203ENST00000393118 IGKV1D-39P04432 117 aa8.78□□□□□ -1
CALD1-203ENST00000393118 PAX9P55771 341 aa8.78□□□□□ -1
CALD1-203ENST00000393118 TCTAP57738 103 aa8.78□□□□□ -1
CALD1-203ENST00000393118 KRTAP27-1Q3LI81 207 aa8.78□□□□□ -1
CALD1-203ENST00000393118 AARDQ4LEZ3 155 aa8.78□□□□□ -1
CALD1-203ENST00000393118 MRPL54Q6P161 138 aaKnown RBP8.78□□□□□ -1
CALD1-203ENST00000393118 C1orf162Q8NEQ5 155 aaPredicted RBP8.78□□□□□ -1
CALD1-203ENST00000393118 OR10G8Q8NGN5 311 aa8.78□□□□□ -1
CALD1-203ENST00000393118 PSMG3Q9BT73 122 aaPredicted RBP8.78□□□□□ -1
CALD1-203ENST00000393118 SLC25A10Q9UBX3 287 aaPredicted RBP8.78□□□□□ -1
CALD1-203ENST00000393118 TCF19Q9Y242 345 aa8.78□□□□□ -1
CALD1-203ENST00000393118 IGHV3-72A0A0B4J1Y9 119 aa8.77□□□□□ -1
CALD1-203ENST00000393118 SERF1AO75920 110 aa8.77□□□□□ -1
CALD1-203ENST00000393118 IGHV3-48P01763 117 aa8.77□□□□□ -1
CALD1-203ENST00000393118 OPRK1P41145 380 aa8.77□□□□□ -1
CALD1-203ENST00000393118 UBE2V1Q13404 147 aa8.77□□□□□ -1
CALD1-203ENST00000393118 WDR31Q8NA23 367 aa8.77□□□□□ -1
CALD1-203ENST00000393118 NPCDR1Q9BY65 106 aa8.77□□□□□ -1
CALD1-203ENST00000393118 CISD1Q9NZ45 108 aaKnown RBP8.77□□□□□ -1
CALD1-203ENST00000393118 NDUFS8O00217 210 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 PRRX1P54821 245 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 GCSAMLQ5JQS6 135 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 TPTE2P1Q5T6R2 138 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 CD177Q8N6Q3 437 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 GATAD1Q8WUU5 269 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 JPT1Q9UK76 154 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 LINC00473A8K010 186 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 COX7A1P24310 79 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 RHOBP62745 196 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 HES1Q14469 280 aa8.77□□□□□ -1.01
CALD1-203ENST00000393118 FAM216AQ8WUB2 273 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms