RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 ZNF826PQ6ZT77 177 aa15.76■□□□□ 0.11
CCDC50-202ENST00000392456 ATP5SQ99766 215 aa15.76■□□□□ 0.11
CCDC50-202ENST00000392456 RTL8AQ9BWD3 113 aa15.76■□□□□ 0.11
CCDC50-202ENST00000392456 OR7C1O76099 320 aaPredicted RBP15.75■□□□□ 0.11
CCDC50-202ENST00000392456 OR10J4P0C629 311 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 CEBPDP49716 269 aaPredicted RBP15.75■□□□□ 0.11
CCDC50-202ENST00000392456 BSPH1Q075Z2 132 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 SPRNQ5BIV9 151 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 OR2Z1Q8NG97 314 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 SPTAN1Q13813 2472 aaKnown RBP15.75■□□□□ 0.11
CCDC50-202ENST00000392456 GLRXP35754 106 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 NEGR1Q7Z3B1 354 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 C11orf53Q8IXP5 236 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 MKXQ8IYA7 352 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 SIGLECL1Q8N7X8 197 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 SIGMAR1Q99720 223 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 ST6GALNAC5Q9BVH7 336 aa15.75■□□□□ 0.11
CCDC50-202ENST00000392456 IGKV1D-8A0A087WSZ0 117 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 DUXBA0A1W2PPF3 345 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 UQCRFS1P47985 274 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 GTSF1LQ9H1H1 148 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 FLNCQ14315 2725 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 CEBPZOSA8MTT3 80 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 HS3ST1O14792 307 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 ST8SIA3O43173 380 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 ZNF253O75346 499 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 GPX1P07203 203 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 S100GP29377 79 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 TAS2R46P59540 309 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 YPEL3P61236 119 aaPredicted RBP15.74■□□□□ 0.11
CCDC50-202ENST00000392456 FGF12P61328 243 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 RUNX1Q01196 453 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 ZNF787Q6DD87 383 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 LINC01560Q8TB33 94 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 CACNA1DQ01668 2161 aa15.74■□□□□ 0.11
CCDC50-202ENST00000392456 TRAV8-6A0A0B4J262 113 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 LRP5LA4QPB2 252 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 FAM78BQ5VT40 261 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 Q6ZPA2 131 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 IGSF23A1L1A6 192 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 FAM24AA6NFZ4 105 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 J3QT63 122 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 WNT2P09544 360 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 PET117Q6UWS5 81 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 OR2C3Q8N628 320 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 PRR7Q8TB68 274 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 C11orf1Q9H5F2 150 aa15.73■□□□□ 0.11
CCDC50-202ENST00000392456 HSPB6O14558 160 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 CRISP2P16562 243 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 TMEM267Q0VDI3 215 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-202ENST00000392456 UFSP1Q6NVU6 142 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 OR8I2Q8N0Y5 310 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 FAM103A1Q9BTL3 118 aaKnown RBP15.72■□□□□ 0.11
CCDC50-202ENST00000392456 SSBP4Q9BWG4 385 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-202ENST00000392456 PKIBQ9C010 78 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 CRYM-AS1A6NIL9 109 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 HAND1O96004 215 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 IGHV3-13P01766 116 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 OR52M1Q8NGK5 317 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 WNT10AQ9GZT5 417 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 NRN1Q9NPD7 142 aa15.72■□□□□ 0.11
CCDC50-202ENST00000392456 KIAA2026Q5HYC2 2103 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 WNT9BO14905 357 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 PDCD6O75340 191 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 UCP1P25874 307 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 MPV17L2Q567V2 206 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 LGI3Q8N145 548 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 FAM58AQ8N1B3 248 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 PPP1R3CQ9UQK1 317 aa15.71■□□□□ 0.11
CCDC50-202ENST00000392456 IGLV3-9A0A075B6K5 115 aa15.71■□□□□ 0.1
CCDC50-202ENST00000392456 ERVK11-1P61568 191 aa15.71■□□□□ 0.1
CCDC50-202ENST00000392456 TCF23Q7RTU1 214 aa15.71■□□□□ 0.1
CCDC50-202ENST00000392456 F2Z2F3 143 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 TCTEX1D4Q5JR98 221 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 MBD3L1Q8WWY6 194 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 NEUROG1Q92886 237 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 CXXC4Q9H2H0 198 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 Q0VG73 95 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 SPIN3Q5JUX0 258 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 BVES-AS1Q5T3Y7 98 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 BAGE3Q86Y29 109 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 BAGE2Q86Y30 109 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 TAAR3PQ9P1P4 343 aa15.7■□□□□ 0.1
CCDC50-202ENST00000392456 SPRY3O43610 288 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 ZNF205O95201 554 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 TFF1P04155 84 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 GNLYP22749 145 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 SRSF7Q16629 238 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC50-202ENST00000392456 PLPPR1Q8TBJ4 325 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 ZNF442Q9H7R0 627 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 HRNRQ86YZ3 2850 aaPredicted RBP15.69■□□□□ 0.1
CCDC50-202ENST00000392456 DCHS2Q6V1P9 2916 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 GYPAP02724 150 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 SMIM17P0DL12 118 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 RAB31Q13636 194 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 GNMTQ14749 295 aa15.69■□□□□ 0.1
CCDC50-202ENST00000392456 EAF1Q96JC9 268 aaPredicted RBP15.69■□□□□ 0.1
CCDC50-202ENST00000392456 PEF1Q9UBV8 284 aaKnown RBP15.69■□□□□ 0.1
CCDC50-202ENST00000392456 TSPAN13O95857 204 aa15.68■□□□□ 0.1
CCDC50-202ENST00000392456 LIPFP07098 398 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms