RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 PAQR5Q9NXK6 330 aaPredicted RBP0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 NKIRAS1Q9NYS0 192 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 USE1Q9NZ43 259 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 LHFPL6Q9Y693 200 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 TONSLQ96HA7 1378 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 MAP3K5Q99683 1374 aa0.4□□□□□ -2.35
RNU6-440P-201ENST00000390882 C9orf84Q5VXU9 1444 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 TOPBP1Q92547 1522 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 A0A1B0GV50 99 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 IRGMA1A4Y4 181 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 FUOMA2VDF0 154 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 C21orf140B9A014 251 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 LRRN3E7EW58 273 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 H0Y980 276 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 CETN3O15182 167 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 ACOX3O15254 700 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 SLC16A4O15374 487 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 KRT7P08729 469 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 FAM228BP0C875 321 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 MAGEA2P43356 314 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZNF80P51504 273 aaPredicted RBP0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 FXYD2P54710 66 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 CDK10Q15131 360 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 CLVS2Q5SYC1 327 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 Q6ZS49 121 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 C9orf163Q8N9P6 203 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR5B17Q8NGF7 314 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 C11orf40Q8WZ69 217 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 OPTNQ96CV9 577 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 CNBD2Q96M20 576 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 ERMAPQ96PL5 475 aaPredicted RBP0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 EFCAB1Q9HAE3 211 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 IL36BQ9NZH7 164 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 BAIAP2Q9UQB8 552 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 ATP6V1DQ9Y5K8 247 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 COL4A5P29400 1685 aa0.39□□□□□ -2.35
RNU6-440P-201ENST00000390882 EVC2Q86UK5 1308 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RALGAPA2Q2PPJ7 1873 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 SNAPC4Q5SXM2 1469 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 A0A0J9YY10 115 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 A0A1B0GX78 115 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 TMEM212A6NML5 194 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 FABP5P3A8MUU1 101 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 DEXIO95424 95 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 PMP2P02689 132 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 CLPSP04118 112 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 PRM2P04554 102 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 UBBP0CG47 229 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RNASE3P12724 160 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RPS4Y1P22090 263 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RPS12P25398 132 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 EIF2B2P49770 351 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RAB5BP61020 215 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 SUPT4H1P63272 117 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 TPM4P67936 248 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 CCL20P78556 96 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RUNX1Q01196 453 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RPL18Q07020 188 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 STX5Q13190 355 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZNF345Q14585 488 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 GRK1Q15835 563 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 IBA57Q5T440 356 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 SYPL2Q5VXT5 272 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 TEX36Q5VZQ5 186 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 CD200R1LQ6Q8B3 271 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 AAED1Q7RTV5 226 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 GID4Q8IVV7 300 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 C12orf29Q8N999 325 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZNF565Q8N9K5 539 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 C15orf53Q8NAA6 179 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 ZNF439Q8NDP4 499 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR4C6Q8NH72 309 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 MCFD2Q8NI22 146 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 MRPL30Q8TCC3 161 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 RAB8BQ92930 207 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 ODF3Q96PU9 254 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 SERPINI1Q99574 410 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 LLPHQ9BRT6 129 aaKnown RBP0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 REG4Q9BYZ8 158 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR51I1Q9H343 314 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR5AC2Q9NZP5 309 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 SNURFQ9Y675 71 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 DLG5Q8TDM6 1919 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 TTC21AQ8NDW8 1320 aa0.38□□□□□ -2.35
RNU6-440P-201ENST00000390882 HEATR5BQ9P2D3 2071 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 KIAA2026Q5HYC2 2103 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 TRBV20OR9-2A0A075B6H5 130 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 TRAV14DV4A0A0A6YYC5 116 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 EVPLLA8MZ36 301 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 INMT-MINDY4F8WBC2 141 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 GEMIN2O14893 280 aaKnown RBP0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 OR5F1O95221 314 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 SHBGP04278 402 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 ISG15P05161 165 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BOP23527 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BBP33778 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BDP58876 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 HIST1H2BCP62807 126 aa0.37□□□□□ -2.35
RNU6-440P-201ENST00000390882 CTAG1AP78358 180 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms