RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 Q0VG73 95 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 FXYD3Q14802 87 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 ZNF146Q15072 292 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 Q6ZR03 302 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 TP73-AS1Q9UF72 201 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 ZFHX2Q9C0A1 2572 aaPredicted RBP14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 DPRXA6NFQ7 191 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 CD1BP29016 333 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 ASPHD1Q5U4P2 390 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 CBY3A6NI87 242 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 OR4C5Q8NGB2 326 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 SSMEM1Q8WWF3 244 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 C5orf30Q96GV9 206 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 METRNQ9UJH8 293 aa14.64□□□□□ -0.07
SQSTM1-202ENST00000389805 RPEL1Q2QD12 228 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 MRPL54Q6P161 138 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 INO80CQ6PI98 192 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 ZNF738Q8NE65 137 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 COX11Q9Y6N1 276 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 SRIP30626 198 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 GUSBP1Q15486 140 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 H2BFWTQ7Z2G1 175 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 Q8IYB0 196 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 OR52L2PQ8NGH6 319 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 SPOCK3Q9BQ16 436 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 MBNL3Q9NUK0 354 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 AKAP13Q12802 2813 aa14.63□□□□□ -0.07
SQSTM1-202ENST00000389805 ITGB1BP1O14713 200 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 CECR9P0C854 216 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 TSPOP30536 169 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 CDKN1BP46527 198 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 SPATA31B1PQ5VZV4 182 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 TAAR6Q96RI8 345 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 RNASE7Q9H1E1 156 aaKnown RBP14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 ATMQ13315 3056 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 IGKV3-15P01624 115 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 PDLIM3Q53GG5 364 aaPredicted RBP14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 DOLPP1Q86YN1 238 aa14.62□□□□□ -0.07
SQSTM1-202ENST00000389805 C15orf62A8K5M9 175 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 HOXC12P31275 282 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 BRWD1-AS2P59051 145 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 RFESDQ8TAC1 157 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 A8MXE2 369 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 C12orf77C9JDV5 145 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 TIMM8AO60220 97 aaPredicted RBP14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 FOXH1O75593 365 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 FBLN7Q53RD9 439 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 MRGPRDQ8TDS7 321 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 KCNS1Q96KK3 526 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 BET1LQ9NYM9 111 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 WDR83OSQ9Y284 106 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 NPIPB11E5RHQ5 1161 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 PRR31Q5SQ13 230 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 NIT1Q86X76 327 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 PLPPR2Q96GM1 343 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 DCTN5Q9BTE1 182 aa14.61□□□□□ -0.07
SQSTM1-202ENST00000389805 LOC102724200A0A096LPH7 203 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 IGHV3-43A0A0B4J1X8 118 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 J3QW42 95 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 ZNF324O75467 553 aaPredicted RBP14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 IGHV3-43DP0DP04 118 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 VAMP3Q15836 100 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 DKK4Q9UBT3 224 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 ZNF292O60281 2723 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 TRAV17A0A0B4J275 112 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 RNF212BA8MTL3 300 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 GABRA2P47869 451 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 MOB1BQ7L9L4 216 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 ST6GALNAC6Q969X2 333 aa14.6□□□□□ -0.07
SQSTM1-202ENST00000389805 DEFB108AA8MXU0 73 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 PRRX1P54821 245 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 RELBQ01201 579 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 VWC2Q2TAL6 325 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 WDR82Q6UXN9 313 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 BORCS7Q96B45 105 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 COQ2Q96H96 371 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 EAF1Q96JC9 268 aaPredicted RBP14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 V9GYV3 84 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 CA2P00918 260 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 STAG3L2P0CL84 134 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 STAG3L3P0CL85 134 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 SSTR5P35346 364 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 TCTEX1D1Q8N7M0 179 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 SFXN3Q9BWM7 321 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 CLEC7AQ9BXN2 247 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 HES4Q9HCC6 221 aa14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 SEPSECSQ9HD40 501 aaKnown RBP14.59□□□□□ -0.07
SQSTM1-202ENST00000389805 HBZP02008 142 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 LTC4SQ16873 150 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 Q56UQ5 140 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 IGFL2Q6UWQ7 119 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 ZNF645Q8N7E2 425 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 GALMQ96C23 342 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 VPS25Q9BRG1 176 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 SLC35D1Q9NTN3 355 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 KCNIP1Q9NZI2 227 aa14.58□□□□□ -0.07
SQSTM1-202ENST00000389805 K7EP13 123 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 CXorf1O96002 111 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 P0C879 139 aa14.58□□□□□ -0.08
SQSTM1-202ENST00000389805 TREML4Q6UXN2 200 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 210.7 ms