RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 HLA-DRB1P01911 266 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 AESQ08117 197 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 KRTAP13-4Q3LI77 160 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 SYPL2Q5VXT5 272 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 Q6ZS49 121 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 DYNAPQ8N1N2 210 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 OR5B17Q8NGF7 314 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 CST9LQ9H4G1 147 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 UCK1Q9HA47 277 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 FLT4P35916 1363 aa2.18□□□□□ -2.06
RNU6-40P-201ENST00000384254 COL5A3P25940 1745 aaPredicted RBP2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 WDR90Q96KV7 1748 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 KIAA2026Q5HYC2 2103 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 FABP5P3A8MUU1 101 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 CHP2O43745 196 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 IGHV3-7P01780 117 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 CCL20P78556 96 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 NDUFA5Q16718 116 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 TMEM155Q4W5P6 130 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 IBA57Q5T440 356 aaKnown RBP2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 SLC36A1Q7Z2H8 476 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 ANKRD29Q8N6D5 301 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 ZNF565Q8N9K5 539 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 KLK6Q92876 244 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 PPP1R2P1Q96PQ5 205 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 CISHQ9NSE2 258 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 CMTM6Q9NX76 183 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 VWDEQ8N2E2 1590 aa2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 MDC1Q14676 2089 aaKnown RBP2.17□□□□□ -2.06
RNU6-40P-201ENST00000384254 PTPRBP23467 1997 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 RALGAPA2Q2PPJ7 1873 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 A0A0D9SEW6 157 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 PQLC2LA1A4F0 135 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 KPNA3O00505 521 aaPredicted RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 TRGC1P0CF51 173 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 DEFA4P12838 97 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 HIST1H1TP22492 207 aaPredicted RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 EIF2B2P49770 351 aaKnown RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 SNRPD2P62316 118 aaKnown RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 HBA1P69905 142 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 SPA17Q15506 151 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 LPCAT3Q6P1A2 487 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 RPL22L1Q6P5R6 122 aaKnown RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 MRPL30Q8TCC3 161 aaKnown RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 C8orf76Q96K31 380 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 OR8D2Q9GZM6 311 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 PKIGQ9Y2B9 76 aa2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 FBN1P35555 2871 aaKnown RBP2.16□□□□□ -2.06
RNU6-40P-201ENST00000384254 GREB1Q4ZG55 1949 aa2.15□□□□□ -2.06
RNU6-40P-201ENST00000384254 ITGB4P16144 1822 aa2.15□□□□□ -2.06
RNU6-40P-201ENST00000384254 DOCK10Q96BY6 2186 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 ORC5O43913 435 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 CRYZL1O95825 349 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 NAPSAO96009 420 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 C1QCP02747 245 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BOP23527 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BBP33778 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 EVX1P49640 407 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BDP58876 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BCP62807 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 KCNJ8Q15842 424 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST2H2BEQ16778 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 AADACL3Q5VUY0 350 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 COA5Q86WW8 74 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BHQ93079 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BNQ99877 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 HIST1H2BMQ99879 126 aa2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 CMSS1Q9BQ75 279 aaKnown RBP2.15□□□□□ -2.07
RNU6-40P-201ENST00000384254 TRGV2A0A075B6R0 118 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 TRBV10-2A0A0K0K1G8 114 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 MEIS3P1A6NDR6 274 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 FXYD2P54710 66 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 AQP4P55087 323 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 BORCS7Q96B45 105 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 FBXL12Q9NXK8 326 aa2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 COL11A1P12107 1806 aaPredicted RBP2.14□□□□□ -2.07
RNU6-40P-201ENST00000384254 OR4C46A6NHA9 309 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 TMEM114B3SHH9 223 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 F8W036 122 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 ZNF737O75373 536 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 TTRP02766 147 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 TCRBP04435 133 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 METTL15P1P0C7V9 234 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 RPS4Y1P22090 263 aaKnown RBP2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 RPL5P46777 297 aaKnown RBP2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 STX5Q13190 355 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 SRSF6Q13247 344 aaKnown RBP2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 EDDM3AQ14507 147 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 FAM27BQ5VT28 67 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 TRIM4Q9C037 500 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 MRPL27Q9P0M9 148 aaKnown RBP2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 SLC22A13Q9Y226 551 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 TMEM56-RWDD3S4R434 201 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 MALRD1Q5VYJ5 2156 aa2.13□□□□□ -2.07
RNU6-40P-201ENST00000384254 CPAMD8Q8IZJ3 1885 aa2.12□□□□□ -2.07
RNU6-40P-201ENST00000384254 TRAV9-1A0A075B6T8 112 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms