RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 MAP1LC3BQ9GZQ8 125 aa13.93□□□□□ -0.18
RPAIN-203ENST00000381209 ZNF430Q9H8G1 570 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-203ENST00000381209 DPM3Q9P2X0 92 aa13.93□□□□□ -0.18
RPAIN-203ENST00000381209 LSM4Q9Y4Z0 139 aaKnown RBP13.93□□□□□ -0.18
RPAIN-203ENST00000381209 KLF2Q9Y5W3 355 aaPredicted RBP13.93□□□□□ -0.18
RPAIN-203ENST00000381209 HIVEP3Q5T1R4 2406 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 IGHV3-72A0A0B4J1Y9 119 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 LOC102723971A0A1B0GUV8 181 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 ODF3BA8MYP8 253 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 DNASE2O00115 360 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-203ENST00000381209 CYB5BO43169 146 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 SLC25A17O43808 307 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 CRYGBP07316 175 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 RNASE2P10153 161 aaKnown RBP13.92□□□□□ -0.18
RPAIN-203ENST00000381209 HTR1DP28221 377 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 ICAM4Q14773 271 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 HAGHQ16775 308 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 ARSJQ5FYB0 599 aaPredicted RBP13.92□□□□□ -0.18
RPAIN-203ENST00000381209 SSX7Q7RTT5 188 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 SPOCK3Q9BQ16 436 aa13.92□□□□□ -0.18
RPAIN-203ENST00000381209 MAS1LP35410 378 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 CEACAM3P40198 252 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 PRB3Q04118 309 aaPredicted RBP13.91□□□□□ -0.18
RPAIN-203ENST00000381209 RAB31Q13636 194 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 HNF4GQ14541 408 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 TEPPQ6URK8 271 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 RITA1Q96K30 269 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 MGST2Q99735 147 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 SIRT7Q9NRC8 400 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 YLPM1P49750 1951 aaKnown RBP13.91□□□□□ -0.18
RPAIN-203ENST00000381209 ABCA4P78363 2273 aa13.91□□□□□ -0.18
RPAIN-203ENST00000381209 TPRP12270 2363 aaKnown RBP13.9□□□□□ -0.18
RPAIN-203ENST00000381209 A0A1W2PPI3 338 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 SEC14L6B5MCN3 397 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 IFNA1P01562 189 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 SRP19P09132 144 aaKnown RBP13.9□□□□□ -0.18
RPAIN-203ENST00000381209 PSG5Q15238 335 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 PRSS8Q16651 343 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 HCP5Q6MZN7 132 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 MRPL41Q8IXM3 137 aaKnown RBP13.9□□□□□ -0.18
RPAIN-203ENST00000381209 CLRN3Q8NCR9 226 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 GGTLC1Q9BX51 225 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 GNG13Q9P2W3 67 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 MALRD1Q5VYJ5 2156 aa13.9□□□□□ -0.18
RPAIN-203ENST00000381209 CGB1A6NKQ9 187 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 BCL2P10415 239 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 ZFP36P26651 326 aaKnown RBP13.9□□□□□ -0.19
RPAIN-203ENST00000381209 GPX4P36969 197 aaPredicted RBP13.9□□□□□ -0.19
RPAIN-203ENST00000381209 NPBWR1P48145 328 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.19
RPAIN-203ENST00000381209 SOHLH1Q5JUK2 328 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.9□□□□□ -0.19
RPAIN-203ENST00000381209 OR10W1Q8NGF6 305 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 CACNG8Q8WXS5 425 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 C1orf159Q96HA4 380 aa13.9□□□□□ -0.19
RPAIN-203ENST00000381209 TAGLN2P37802 199 aaKnown RBP13.89□□□□□ -0.19
RPAIN-203ENST00000381209 PDLIM4P50479 330 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 FGF8P55075 233 aaPredicted RBP13.89□□□□□ -0.19
RPAIN-203ENST00000381209 PAX2Q02962 417 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 TMEM249Q2WGJ8 235 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 FAM122CQ6P4D5 195 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 RBMS3Q6XE24 437 aaKnown RBP13.89□□□□□ -0.19
RPAIN-203ENST00000381209 TMEM144Q7Z5S9 345 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 RNASEH2CQ8TDP1 164 aaKnown RBP13.89□□□□□ -0.19
RPAIN-203ENST00000381209 RXFP4Q8TDU9 374 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 SLC25A22Q9H936 323 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 TMA7Q9Y2S6 64 aaKnown RBP13.89□□□□□ -0.19
RPAIN-203ENST00000381209 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 PXMP4Q9Y6I8 212 aa13.89□□□□□ -0.19
RPAIN-203ENST00000381209 OOSP1A8MZH6 123 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 E7EUB6 86 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 NDUFS6O75380 124 aaKnown RBP13.88□□□□□ -0.19
RPAIN-203ENST00000381209 YIF1AO95070 293 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 OR13C7P0DN81 318 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 RPL29P47914 159 aaKnown RBP13.88□□□□□ -0.19
RPAIN-203ENST00000381209 LMO4P61968 165 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 CD69Q07108 199 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-203ENST00000381209 LDLRAD2Q5SZI1 272 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 P2RX4Q99571 388 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 BPESC1Q9GZL8 116 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 TPSG1Q9NRR2 321 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 RELNP78509 3460 aa13.88□□□□□ -0.19
RPAIN-203ENST00000381209 NBEAQ8NFP9 2946 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 IGHV2-70DA0A0C4DH43 119 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 FAM74A7A6NL05 159 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 TIMM23O14925 209 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 ACTL6BO94805 426 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 VENTXO95231 258 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 IGHV4-39P01824 125 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 CDC34P49427 236 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-203ENST00000381209 WT1-ASQ06250 92 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 FAM74A3Q4VXF1 159 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 C10orf55Q5SWW7 151 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 MINOS1Q5TGZ0 78 aa13.87□□□□□ -0.19
RPAIN-203ENST00000381209 VMO1Q7Z5L0 202 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms