RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 TMED3Q9Y3Q3 217 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 CMYA5Q8N3K9 4069 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 TET2Q6N021 2002 aaPredicted RBP9.92□□□□□ -0.82
SMN1-202ENST00000380707 MPTX1A8MV57 137 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 ST8SIA3O43173 380 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 SOX15O60248 233 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 PRAF2O60831 178 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 OXA1LQ15070 435 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 AARDQ4LEZ3 155 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 GGNBP1Q5YKI7 109 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 C12orf45Q8N5I9 185 aaPredicted RBP9.92□□□□□ -0.82
SMN1-202ENST00000380707 C11orf44Q8N8P7 122 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 UXS1Q8NBZ7 420 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 OR5T1Q8NG75 326 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 OR1L8Q8NGR8 309 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 HINT2Q9BX68 163 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
SMN1-202ENST00000380707 A0A1B0GU03 582 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 A0A1W2PN81 502 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 IGHG4P01861 327 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 TRAPPC2P0DI81 140 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 TRAPPC2BP0DI82 140 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 CD28P10747 220 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 AREGP15514 252 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 CHRNA7P36544 502 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 HSPE1P61604 102 aaKnown RBP9.91□□□□□ -0.82
SMN1-202ENST00000380707 SLC35B1P78383 322 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 SMCO1Q147U7 214 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 TATDN3Q17R31 274 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 SPINK9Q5DT21 86 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 TCTEX1D4Q5JR98 221 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 C12orf54Q6X4T0 127 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 LCNL1Q6ZST4 164 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 TMEM68Q96MH6 324 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 GPN1Q9HCN4 374 aaPredicted RBP9.91□□□□□ -0.82
SMN1-202ENST00000380707 COA4Q9NYJ1 87 aa9.91□□□□□ -0.82
SMN1-202ENST00000380707 PKD1L1Q8TDX9 2849 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 SNRPGP15A8MWD9 76 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 IFNA17P01571 189 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 REG1AP05451 166 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 WT1-ASQ06250 92 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 TEX38Q6PEX7 206 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 TTC9CQ8N5M4 171 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 KLK15Q9H2R5 256 aa9.9□□□□□ -0.82
SMN1-202ENST00000380707 CCSO14618 274 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 PITX3O75364 302 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 NXPH3O95157 252 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 IFNA21P01568 189 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 SLC25A6P12236 298 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 PSMB8P28062 276 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 PRCDQ00LT1 54 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 C2orf68Q2NKX9 166 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 OR5M8Q8NGP6 311 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 OR52E5Q8NH55 327 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 OR10C1Q96KK4 312 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 CITED1Q99966 193 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 ZNF747Q9BV97 191 aa9.89□□□□□ -0.83
SMN1-202ENST00000380707 C7orf66A4D0T2 115 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 NPIPB5A8MRT5 1133 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 FBXO24O75426 580 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 PRH1P02810 166 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
SMN1-202ENST00000380707 CRYGCP07315 174 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 OR13C7P0DN81 318 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 PSMB6P28072 239 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 SPCS3P61009 180 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 FOXE3Q13461 319 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 PDLIM3Q53GG5 364 aaPredicted RBP9.88□□□□□ -0.83
SMN1-202ENST00000380707 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 RNF152Q8N8N0 203 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 OR4X2Q8NGF9 303 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 OR1S1Q8NH92 325 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 FAM110DQ8TAY7 271 aaPredicted RBP9.88□□□□□ -0.83
SMN1-202ENST00000380707 MS4A10Q96PG2 267 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 CITED2Q99967 270 aaPredicted RBP9.88□□□□□ -0.83
SMN1-202ENST00000380707 SRSF8Q9BRL6 282 aaKnown RBP9.88□□□□□ -0.83
SMN1-202ENST00000380707 PDCD10Q9BUL8 212 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 ALG5Q9Y673 324 aa9.88□□□□□ -0.83
SMN1-202ENST00000380707 C13orf42A0A1B0GVH6 325 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 ELANEP08246 267 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 PF4V1P10720 104 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 CTRB1P17538 263 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 RAB9AP51151 201 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 CD83Q01151 205 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 TNFRSF9Q07011 255 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 CXorf66Q5JRM2 361 aaPredicted RBP9.87□□□□□ -0.83
SMN1-202ENST00000380707 CTRB2Q6GPI1 263 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 THOC7Q6I9Y2 204 aaKnown RBP9.87□□□□□ -0.83
SMN1-202ENST00000380707 HSD17B13Q7Z5P4 300 aaPredicted RBP9.87□□□□□ -0.83
SMN1-202ENST00000380707 PLEKHA3Q9HB20 300 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 ZNF355PQ9NSJ1 428 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 HSPB7Q9UBY9 170 aa9.87□□□□□ -0.83
SMN1-202ENST00000380707 FAM25EA8MYX2 175 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms