RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 CLINT1Q14677 625 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 AWAT1Q58HT5 328 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM200BQ69YZ2 307 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 Q6ZRM9 215 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 FAM213BQ8TBF2 198 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 DNAJC4Q9NNZ3 241 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 RPS10P5Q9NQ39 176 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 ATRXP46100 2492 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 COL6A6A6NMZ7 2263 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 A0A1B0GW64 132 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 F8WDY8 70 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 CHST1O43916 411 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM50AO95807 157 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 IGKV1-5P01602 117 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 SOD3P08294 240 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 PDLIM4P50479 330 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 LYPD2Q6UXB3 125 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 FGFRL1Q8N441 504 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 C8orf46Q8TAG6 207 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 CLCC1Q96S66 551 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 GAR1Q9NY12 217 aaKnown RBP11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 UMAD1C9J7I0 102 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 M0R1X1 148 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 EPHA1P21709 976 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 ATP6V0CP27449 155 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 TAS2R30P59541 319 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 RPL23AP62750 156 aaKnown RBP11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 BAXQ07812 192 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 CT45A1Q5HYN5 189 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 OR2G3Q8NGZ4 309 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 OR4S2Q8NH73 311 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 CT45A3Q8NHU0 189 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 C7orf77A4D0Y5 90 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 SCGB2A1O75556 95 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 OMGP23515 440 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 IL3RAP26951 378 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 CDX1P47902 265 aaPredicted RBP11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 PAX9P55771 341 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 ERVK-16P61578 105 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 RPL30P62888 115 aaKnown RBP11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 HIST1H2BAQ96A08 127 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 TUBA4BQ9H853 241 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 YAE1D1Q9NRH1 226 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 CACNG5Q9UF02 275 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 ROS1P08922 2347 aa11.34□□□□□ -0.59
TNFSF13-203ENST00000380535 ITPR1Q14643 2758 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 M0R036 132 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 HOXA5P20719 270 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 IZUMO4Q1ZYL8 232 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 PIMREGQ9BSJ6 248 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 UBTD1Q9HAC8 227 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 WSB1Q9Y6I7 421 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 C17orf98A8MV24 154 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 NXPH3O95157 252 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 P0C879 139 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 ZNF134P52741 427 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 EFNA4P52798 201 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 ODF3L1Q8IXM7 274 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 TMEM186Q96B77 213 aa11.33□□□□□ -0.6
TNFSF13-203ENST00000380535 HIVEP3Q5T1R4 2406 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 A0A1B0GV50 99 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 LINC00473A8K010 186 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 C19orf84I3L1E1 186 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 DYNLT3P51808 116 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 DLX6P56179 175 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 BRWD1-AS2P59051 145 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 RHEBQ15382 184 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 OR9G1Q8NH87 305 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 DDB2Q92466 427 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 PRO1933Q9H354 126 aa11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 SMG1Q96Q15 3661 aaKnown RBP11.32□□□□□ -0.6
TNFSF13-203ENST00000380535 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 SYNGR2O43760 224 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 CST7O76096 145 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 S1PR2O95136 353 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 RAB11AP62491 216 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 ZNF295-AS1Q8N0V1 137 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 NHLRC2Q8NBF2 726 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 CIB3Q96Q77 187 aaPredicted RBP11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 RFNGQ9Y644 331 aa11.31□□□□□ -0.6
TNFSF13-203ENST00000380535 FCGR3BO75015 233 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms