RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 COL8A2P25067 703 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 CEBPGP53567 150 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 PRRX1P54821 245 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 TEPPQ6URK8 271 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 TGIF2LXQ8IUE1 241 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 OR1L8Q8NGR8 309 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 C8orf46Q8TAG6 207 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 HIST1H2BAQ96A08 127 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 CBLN4Q9NTU7 201 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 ZNRD1Q9P1U0 126 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 MIOXQ9UGB7 285 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 TET2Q6N021 2002 aaPredicted RBP18.79■□□□□ 0.6
VPS16-201ENST00000380443 GNLYP22749 145 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 AKR1C3P42330 323 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 GGTLC1Q9BX51 225 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 A0A1W2PN81 502 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 A0A1W2PPV4 95 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 CTRB1P17538 263 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 CHRNA7P36544 502 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 LGALS7P47929 136 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 RPL8P62917 257 aaKnown RBP18.78■□□□□ 0.6
VPS16-201ENST00000380443 BSXQ3C1V8 233 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 CTRB2Q6GPI1 263 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 ZNF841Q6ZN19 808 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 C11orf42Q8N5U0 333 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 NEU4Q8WWR8 484 aaPredicted RBP18.78■□□□□ 0.6
VPS16-201ENST00000380443 MGST2Q99735 147 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 COMMD5Q9GZQ3 224 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 PRELID1Q9Y255 219 aa18.78■□□□□ 0.6
VPS16-201ENST00000380443 hCG_1809904A0A1W2PP81 198 aa18.77■□□□□ 0.6
VPS16-201ENST00000380443 A0A1W2PPE2 198 aa18.77■□□□□ 0.6
VPS16-201ENST00000380443 A0A1W2PR64 198 aa18.77■□□□□ 0.6
VPS16-201ENST00000380443 A0A1W2PRV1 198 aa18.77■□□□□ 0.6
VPS16-201ENST00000380443 HINT2Q9BX68 163 aa18.77■□□□□ 0.6
VPS16-201ENST00000380443 OR2C1O95371 312 aa18.77■□□□□ 0.59
VPS16-201ENST00000380443 RPL29P47914 159 aaKnown RBP18.77■□□□□ 0.59
VPS16-201ENST00000380443 ERHP84090 104 aaKnown RBP18.77■□□□□ 0.59
VPS16-201ENST00000380443 HNF4GQ14541 408 aa18.77■□□□□ 0.59
VPS16-201ENST00000380443 TXNDC17Q9BRA2 123 aa18.77■□□□□ 0.59
VPS16-201ENST00000380443 NDUFA4L2Q9NRX3 87 aa18.77■□□□□ 0.59
VPS16-201ENST00000380443 PXMP4Q9Y6I8 212 aa18.77■□□□□ 0.59
VPS16-201ENST00000380443 UQCRFS1P47985 274 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 RAB5BP61020 215 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 ARSJQ5FYB0 599 aaPredicted RBP18.76■□□□□ 0.59
VPS16-201ENST00000380443 OR8B3Q8NGG8 313 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 MALSU1Q96EH3 234 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 TIMD4Q96H15 378 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 OR8B2Q96RD0 313 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 TMEM242Q9NWH2 141 aa18.76■□□□□ 0.59
VPS16-201ENST00000380443 CD81P60033 236 aa18.75■□□□□ 0.59
VPS16-201ENST00000380443 VMA21Q3ZAQ7 101 aa18.75■□□□□ 0.59
VPS16-201ENST00000380443 BEND2Q8NDZ0 799 aa18.75■□□□□ 0.59
VPS16-201ENST00000380443 YIF1AO95070 293 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 CDSNQ15517 529 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 CACNG8Q8WXS5 425 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 SDF2L1Q9HCN8 221 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 ROS1P08922 2347 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 C1orf196B1AJZ1 125 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 TMEM144Q7Z5S9 345 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 NANPQ8TBE9 248 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 NAT8Q9UHE5 227 aa18.74■□□□□ 0.59
VPS16-201ENST00000380443 AMMECR1Q9Y4X0 333 aaPredicted RBP18.74■□□□□ 0.59
VPS16-201ENST00000380443 GPX4P36969 197 aaPredicted RBP18.73■□□□□ 0.59
VPS16-201ENST00000380443 REG1BP48304 166 aa18.73■□□□□ 0.59
VPS16-201ENST00000380443 WDR25Q64LD2 544 aaPredicted RBP18.73■□□□□ 0.59
VPS16-201ENST00000380443 C11orf71Q6IPW1 123 aa18.73■□□□□ 0.59
VPS16-201ENST00000380443 MRPL41Q8IXM3 137 aaKnown RBP18.73■□□□□ 0.59
VPS16-201ENST00000380443 CLEC7AQ9BXN2 247 aa18.73■□□□□ 0.59
VPS16-201ENST00000380443 BIN3Q9NQY0 253 aa18.73■□□□□ 0.59
VPS16-201ENST00000380443 IGHV2-26A0A0B4J1V2 119 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 PPIAL4CA0A0B4J2A2 164 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 ZNF727A8MUV8 499 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 IGLV1-47P01700 117 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 PPIAL4GP0DN37 164 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 RNASE2P10153 161 aaKnown RBP18.72■□□□□ 0.59
VPS16-201ENST00000380443 RAB5AP20339 215 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 B2MP61769 119 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 HLA-DRB5Q30154 266 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 SMUG1Q53HV7 270 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 CTDSP1Q9GZU7 261 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 TMPRSS5Q9H3S3 457 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 LYNX1G3V0Z9 82 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 CXorf1O96002 111 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 IGLV2-23P01705 113 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 STAG3L2P0CL84 134 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 STAG3L3P0CL85 134 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 LYNX1P0DP58 116 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 MYOD1P15172 320 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 SUB1P53999 127 aaKnown RBP eCLIP18.72■□□□□ 0.59
VPS16-201ENST00000380443 MIC13Q5XKP0 118 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 TEX45Q8NA69 505 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 LY6G5BQ8NDX9 201 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 C1orf159Q96HA4 380 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 YPEL4Q96NS1 127 aa18.72■□□□□ 0.59
VPS16-201ENST00000380443 HMGB3O15347 200 aaKnown RBP18.71■□□□□ 0.59
VPS16-201ENST00000380443 PDE6DO43924 150 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 RHOBP62745 196 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 CYP2G1PQ6ZSU1 146 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 ISOC2Q96AB3 205 aa18.71■□□□□ 0.59
VPS16-201ENST00000380443 SLC35E1Q96K37 410 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms