RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 WDR54Q9H977 334 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 FXYD1O00168 92 aa10.54□□□□□ -0.72
CHD3-203ENST00000380358 NDUFA2O43678 99 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 KIAA0040Q15053 153 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 FNDC4Q9H6D8 234 aaPredicted RBP10.53□□□□□ -0.72
CHD3-203ENST00000380358 A0A1B0GUL6 1792 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 CCL3L1P16619 93 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 FGF9P31371 208 aaPredicted RBP10.53□□□□□ -0.72
CHD3-203ENST00000380358 MESP2Q0VG99 397 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 UQCR10Q9UDW1 63 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 TNFSF18Q9UNG2 199 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 A0A1B0GV90 55 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 LILRA1O75019 489 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 PTP4A3O75365 173 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 PRB2P02812 416 aaPredicted RBP10.53□□□□□ -0.72
CHD3-203ENST00000380358 GATA4P43694 442 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 TFF3Q07654 80 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 LOXL4Q96JB6 756 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 PRSS22Q9GZN4 317 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 C21orf62Q9NYP8 219 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 AMELYQ99218 206 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 MTCL1Q9Y4B5 1905 aaKnown RBP10.53□□□□□ -0.72
CHD3-203ENST00000380358 F8WEM9 126 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 HOXD4P09016 255 aaPredicted RBP10.53□□□□□ -0.72
CHD3-203ENST00000380358 NAT1P18440 290 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 DTX2Q86UW9 622 aa10.53□□□□□ -0.72
CHD3-203ENST00000380358 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
CHD3-203ENST00000380358 CADP27708 2225 aa10.52□□□□□ -0.72
CHD3-203ENST00000380358 TRGV1A0A0A0MS02 117 aa10.52□□□□□ -0.72
CHD3-203ENST00000380358 GGTLC3B5MD39 225 aa10.52□□□□□ -0.72
CHD3-203ENST00000380358 HLA-DQA1P01909 254 aa10.52□□□□□ -0.72
CHD3-203ENST00000380358 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.72
CHD3-203ENST00000380358 TMEM186Q96B77 213 aa10.52□□□□□ -0.72
CHD3-203ENST00000380358 STAG3L3P0CL85 134 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
CHD3-203ENST00000380358 C1QAP02745 245 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 CELA3BP08861 270 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 DEFB130BP0DP73 79 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 DEFB130AP0DP74 79 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 ST20Q9HBF5 79 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 GSN-AS1Q9NRJ2 163 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 YLPM1P49750 1951 aaKnown RBP10.52□□□□□ -0.73
CHD3-203ENST00000380358 NBEAP1P0C6P0 100 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 ZNF562Q6V9R5 426 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 SFXN3Q9BWM7 321 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 SURF2Q15527 256 aaPredicted RBP10.52□□□□□ -0.73
CHD3-203ENST00000380358 ZNF474Q6S9Z5 364 aaPredicted RBP10.52□□□□□ -0.73
CHD3-203ENST00000380358 RNF182Q8N6D2 247 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 DPM3Q9P2X0 92 aa10.52□□□□□ -0.73
CHD3-203ENST00000380358 NDUFS5O43920 106 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 TIAF1O95411 115 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 FAM27BQ5VT28 67 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 POLEQ07864 2286 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 ACTL10Q5JWF8 245 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 A0A1W2PPV9 198 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 TOMM40O96008 361 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 C1QTNF12Q5T7M4 302 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 A0A1W2PQF6 199 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 PEX11BO96011 259 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 RFPL3SP0C7P2 107 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 GCHFRP30047 84 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 EGR4Q05215 589 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 DOCK5Q9H7D0 1870 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 PILRBQ9UKJ0 227 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 ANAPC10Q9UM13 185 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 BTAF1O14981 1849 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 CA11O75493 328 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 FUT5Q11128 374 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 BRD3OSQ6XYD6 125 aa10.51□□□□□ -0.73
CHD3-203ENST00000380358 NOVP48745 357 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 NDPQ00604 133 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 ZNF600Q6ZNG1 722 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 WDFY2Q96P53 400 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 TMEM222Q9H0R3 208 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 TRAV14DV4A0A0A6YYC5 116 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.5□□□□□ -0.73
CHD3-203ENST00000380358 IL6RP08887 468 aaPredicted RBP10.5□□□□□ -0.73
CHD3-203ENST00000380358 SLC25A28Q96A46 364 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 MEGF9Q9H1U4 602 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 NHP2Q9NX24 153 aaKnown RBP10.5□□□□□ -0.73
CHD3-203ENST00000380358 ARFGEF3Q5TH69 2177 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 Q9H3A6 140 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 DOCK7Q96N67 2140 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 GLRXP35754 106 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 KLRD1Q13241 179 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
CHD3-203ENST00000380358 HS3ST3B1Q9Y662 390 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 IGLV3-16A0A075B6K0 115 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 TGFBR3LH3BV60 316 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 SERF2P84101 59 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 CD300EQ496F6 205 aaPredicted RBP10.5□□□□□ -0.73
CHD3-203ENST00000380358 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
CHD3-203ENST00000380358 MYO16Q9Y6X6 1858 aa10.49□□□□□ -0.73
CHD3-203ENST00000380358 ABCA4P78363 2273 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms