RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 OR9G9P0C7N8 305 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 RAB11AP62491 216 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 AESQ08117 197 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 UTF1Q5T230 341 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 LCN15Q6UWW0 184 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 TMEM144Q7Z5S9 345 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 RNASEH2CQ8TDP1 164 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 TIMD4Q96H15 378 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 UFSP2Q9NUQ7 469 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 USP9XQ93008 2570 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 ZFP92A6NM28 416 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 CLDN34H7C241 214 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 F2RL2O00254 374 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 MGST3O14880 152 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 DUTP33316 252 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 SSTR5P35346 364 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 MEF2CQ06413 473 aaPredicted RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 SPANXN5Q5MJ07 72 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 TGIF2LYQ8IUE0 185 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 ZCCHC24Q8N2G6 241 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 OR10A7Q8NGE5 316 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 C10orf105Q8TEF2 133 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 GALMQ96C23 342 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 FAM210BQ96KR6 192 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 KCNIP1Q9NZI2 227 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 NAT8Q9UHE5 227 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 GAB2Q9UQC2 676 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 DSCAMO60469 2012 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 TGOLN2O43493 480 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 GGCTO75223 188 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 RBP4P02753 201 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 OPN1MWP04001 364 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 OPN1MW2P0DN77 364 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 OPN1MW3P0DN78 364 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 COL10A1Q03692 680 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 DEFB113Q30KQ7 82 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 ZNF841Q6ZN19 808 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 TCF23Q7RTU1 214 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 SRD5A3Q9H8P0 318 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 WDR83OSQ9Y284 106 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 LSM4Q9Y4Z0 139 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 ADGRG4Q8IZF6 3080 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 DIDO1Q9BTC0 2240 aaKnown RBP6.28□□□□□ -1.4
CDKL5-202ENST00000379996 PCNX1Q96RV3 2341 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 ZNF729A6NN14 1252 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 SLC25A16P16260 332 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 ZNF134P52741 427 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 Q3ZCU0 254 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 ACTL10Q5JWF8 245 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 PRR18Q8N4B5 295 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 OR4X1Q8NH49 305 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 OR52E5Q8NH55 327 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 DTD1Q8TEA8 209 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 PARLQ9H300 379 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 MANBALQ9NQG1 85 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 OR6C3Q9NZP0 311 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 FLNCQ14315 2725 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 HIST1H1BP16401 226 aaKnown RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 CDKN1AP38936 164 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 C16orf82Q7Z2V1 217 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 LY6G5BQ8NDX9 201 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 CCL17Q92583 94 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 HSD17B10Q99714 261 aaKnown RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 HIST1H2BLQ99880 126 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 QTRT1Q9BXR0 403 aaKnown RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 PATZ1Q9HBE1 687 aaKnown RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 KCNS2Q9ULS6 477 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 URGCP-MRPS24S4R325 110 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 A0A096LNT2 108 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 MARCH11A6NNE9 402 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 ITGB1BP1O14713 200 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 RBFOX2O43251 390 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 RPL15P61313 204 aaKnown RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 ZNF816Q0VGE8 651 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-202ENST00000379996 OR2B11Q5JQS5 317 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 NCR3LG1Q68D85 454 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 BTNL3Q6UXE8 466 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 ZNF439Q8NDP4 499 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 FOXC2Q99958 501 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 PIMREGQ9BSJ6 248 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 RAB9BQ9NP90 201 aa6.27□□□□□ -1.41
CDKL5-202ENST00000379996 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-202ENST00000379996 ZNF674Q2M3X9 581 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 TMEM95Q3KNT9 176 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 MORN2Q502X0 79 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 KIR3DL3Q8N743 410 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 MRGPRDQ8TDS7 321 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 GPR61Q9BZJ8 451 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 DCAF16Q9NXF7 216 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 GAR1Q9NY12 217 aaKnown RBP6.26□□□□□ -1.41
CDKL5-202ENST00000379996 USF3Q68DE3 2245 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 TRBV20OR9-2A0A075B6H5 130 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 PPIAL4CA0A0B4J2A2 164 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 YPEL1O60688 119 aa6.26□□□□□ -1.41
CDKL5-202ENST00000379996 FCN3O75636 299 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms