RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SPIN2BQ9BPZ2 258 aa8.96□□□□□ -0.97
NEDD9-201ENST00000379433 COLCA2A8K830 154 aa8.96□□□□□ -0.98
NEDD9-201ENST00000379433 MDH2P40926 338 aaKnown RBP8.96□□□□□ -0.98
NEDD9-201ENST00000379433 MBNL2Q5VZF2 373 aaKnown RBP8.96□□□□□ -0.98
NEDD9-201ENST00000379433 TMEM252Q8N6L7 170 aa8.96□□□□□ -0.98
NEDD9-201ENST00000379433 OR2G3Q8NGZ4 309 aa8.96□□□□□ -0.98
NEDD9-201ENST00000379433 PLEKHA2Q9HB19 425 aa8.96□□□□□ -0.98
NEDD9-201ENST00000379433 LINC00473A8K010 186 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 OR7C2O60412 319 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 JTBO76095 146 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 TSPAN15O95858 294 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 CD55P08174 381 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 IL6RP08887 468 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-201ENST00000379433 SCGB1A1P11684 91 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 FABP4P15090 132 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 CDSNQ15517 529 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 MIDNQ504T8 468 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 CST9LP1Q5W188 147 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 OR4D5Q8NGN0 318 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 OR4S2Q8NH73 311 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 OR5R1Q8NH85 324 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 RSG1Q9BU20 258 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 SAP30LQ9HAJ7 183 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 SMCO4Q9NRQ5 59 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 ZNF585BQ52M93 769 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 KCNJ16Q9NPI9 418 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 HCFC1P51610 2035 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 USP9YO00507 2555 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-201ENST00000379433 SRRM5B3KS81 715 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 IFNL4K9M1U5 179 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 PPP1R2P9O14990 202 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 GPR137BO60478 399 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 DEFA4P12838 97 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 NPBWR1P48145 328 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 TMPRSS3P57727 454 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 SRPXP78539 464 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 SIGLEC15Q6ZMC9 328 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 OR8I2Q8N0Y5 310 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 HIST1H2BAQ96A08 127 aa8.95□□□□□ -0.98
NEDD9-201ENST00000379433 MMP23AO75900 390 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 THBDP07204 575 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 ZNF134P52741 427 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 ERVFC1-1P60608 527 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 NMSQ5H8A3 153 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 EIF5AL1Q6IS14 154 aaKnown RBP8.94□□□□□ -0.98
NEDD9-201ENST00000379433 MTURNQ8N3F0 131 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 LIN7CQ9NUP9 197 aaKnown RBP8.94□□□□□ -0.98
NEDD9-201ENST00000379433 PSENENQ9NZ42 101 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 RNF7Q9UBF6 113 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 HRNRQ86YZ3 2850 aaPredicted RBP8.94□□□□□ -0.98
NEDD9-201ENST00000379433 CEBPZOSA8MTT3 80 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 CCL3L1P16619 93 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 NKX6-1P78426 367 aaPredicted RBP8.94□□□□□ -0.98
NEDD9-201ENST00000379433 MOB1BQ7L9L4 216 aa8.94□□□□□ -0.98
NEDD9-201ENST00000379433 RNASEH2CQ8TDP1 164 aaKnown RBP8.94□□□□□ -0.98
NEDD9-201ENST00000379433 BARX1Q9HBU1 254 aaPredicted RBP8.94□□□□□ -0.98
NEDD9-201ENST00000379433 WIPF1O43516 503 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 FAM157CP0CG43 387 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 ATP6V0CP27449 155 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 PSG3Q16557 428 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 C15orf54Q8N8G6 183 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 SIRPDQ9H106 197 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 MBNL3Q9NUK0 354 aaKnown RBP8.93□□□□□ -0.98
NEDD9-201ENST00000379433 SNAPC5O75971 98 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 MT-ND4LP03901 98 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 OR13C7P0DN81 318 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 TMEM41BQ5BJD5 291 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 H2BFWTQ7Z2G1 175 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 OR1N2Q8NGR9 330 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 ORAOV1Q8WV07 137 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 NEIL1Q96FI4 390 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-201ENST00000379433 CABLES2Q9BTV7 478 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 TLNRD1Q9H1K6 362 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 HES4Q9HCC6 221 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 NAV3Q8IVL0 2385 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.93□□□□□ -0.98
NEDD9-201ENST00000379433 SYNGR2O43760 224 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 OR2C1O95371 312 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 EIF5AP63241 154 aaKnown RBP8.93□□□□□ -0.98
NEDD9-201ENST00000379433 SRSF1Q07955 248 aaKnown RBP eCLIP8.93□□□□□ -0.98
NEDD9-201ENST00000379433 HMGN3Q15651 99 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 MRGPRGQ86SM5 289 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 ZNF645Q8N7E2 425 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 PHYHIPLQ96FC7 376 aa8.93□□□□□ -0.98
NEDD9-201ENST00000379433 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.93□□□□□ -0.98
NEDD9-201ENST00000379433 TANC2Q9HCD6 1990 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 USP9XQ93008 2570 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-201ENST00000379433 UBE2L5PA0A1B0GUS4 154 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.92□□□□□ -0.98
NEDD9-201ENST00000379433 CORTO00230 105 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 ZG16O60844 167 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 ZNF737O75373 536 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 MYOD1P15172 320 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 P2RY1P47900 373 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 PLP1P60201 277 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 RPS23P62266 143 aaKnown RBP8.92□□□□□ -0.98
NEDD9-201ENST00000379433 RPL23AP62750 156 aaKnown RBP8.92□□□□□ -0.98
NEDD9-201ENST00000379433 BAXQ07812 192 aa8.92□□□□□ -0.98
NEDD9-201ENST00000379433 SLC35E4Q6ICL7 350 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms