RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PITX3O75364 302 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 IGKV1-16P04430 117 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 HNRNPCP07910 306 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF18-202ENST00000378572 SMCO1Q147U7 214 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 RHOVQ96L33 236 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 DUX3Q96PT4 197 aa10.79□□□□□ -0.68
PRPF18-202ENST00000378572 SHOXO15266 292 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 IL6RP08887 468 aaPredicted RBP10.78□□□□□ -0.68
PRPF18-202ENST00000378572 PSMB6P28072 239 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 LGALS7P47929 136 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 GSKIPQ9P0R6 139 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 FAM90A26D6RGX4 464 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 MPC2O95563 127 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 PET100P0DJ07 73 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 MYCNOSP40205 109 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 AARDQ4LEZ3 155 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 Q6ZRM9 215 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 STPG2Q8N412 459 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 COMMD1Q8N668 190 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 HYLS1Q96M11 299 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 HARBI1Q96MB7 349 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 BET1LQ9NYM9 111 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 CACNG5Q9UF02 275 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 CACFD1Q9UGQ2 172 aa10.78□□□□□ -0.68
PRPF18-202ENST00000378572 TRAV14DV4A0A0A6YYC5 116 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 SMLR1H3BR10 107 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 BOLA2-SMG1P6H3BVE0 249 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 SLC25A4P12235 298 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 NKX2-1P43699 371 aaPredicted RBP10.77□□□□□ -0.69
PRPF18-202ENST00000378572 ID3Q02535 119 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 EGFEM1PQ0D2K5 195 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 EBI3Q14213 229 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 OR4A47Q6IF82 309 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 NOXA1Q86UR1 476 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 PUSL1Q8N0Z8 303 aaKnown RBP10.77□□□□□ -0.69
PRPF18-202ENST00000378572 VSTM2AQ8TAG5 236 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.77□□□□□ -0.69
PRPF18-202ENST00000378572 TMEM140Q9NV12 185 aa10.77□□□□□ -0.69
PRPF18-202ENST00000378572 ZMAT5Q9UDW3 170 aaKnown RBP10.77□□□□□ -0.69
PRPF18-202ENST00000378572 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
PRPF18-202ENST00000378572 AP4M1O00189 453 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 SPDEFO95238 335 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 FGF2P09038 288 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 LYL1P12980 280 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 UBE2KP61086 200 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 RPS16P62249 146 aaKnown RBP10.76□□□□□ -0.69
PRPF18-202ENST00000378572 RAB32Q13637 225 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 Q5BKY6 102 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 CXorf66Q5JRM2 361 aaPredicted RBP10.76□□□□□ -0.69
PRPF18-202ENST00000378572 TEX38Q6PEX7 206 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 OR2T10Q8NGZ9 312 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 OR4A5Q8NH83 315 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 OR1S1Q8NH92 325 aa10.76□□□□□ -0.69
PRPF18-202ENST00000378572 EAF1Q96JC9 268 aaPredicted RBP10.76□□□□□ -0.69
PRPF18-202ENST00000378572 TSNAXQ99598 290 aaKnown RBP10.76□□□□□ -0.69
PRPF18-202ENST00000378572 HMSDA8MTL9 139 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 SNAPC5O75971 98 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 IGLV2-23P01705 113 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 IGHG2P01859 326 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 MBPP02686 304 aaPredicted RBP10.75□□□□□ -0.69
PRPF18-202ENST00000378572 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 SAA1P0DJI8 122 aaPredicted RBP10.75□□□□□ -0.69
PRPF18-202ENST00000378572 IZUMO4Q1ZYL8 232 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 DEFB136Q30KP8 78 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 VMA21Q3ZAQ7 101 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 PRSS54Q6PEW0 395 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 TMEM65Q6PI78 240 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 LCNL1Q6ZST4 164 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 ZNF429Q86V71 674 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 THAP6Q8TBB0 222 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 B9D2Q9BPU9 175 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 RASL11BQ9BPW5 248 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 GON7Q9BXV9 100 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 NBEAL2Q6ZNJ1 2754 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 K7EPK0 472 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 CCL24O00175 119 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 UPK2O00526 184 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 MOSP00540 346 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 RLN2P04090 185 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
PRPF18-202ENST00000378572 LRRC37A5PQ49AS3 106 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 VKORC1L1Q8N0U8 176 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 FAM71E2Q8N5Q1 922 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 OR11H4Q8NGC9 324 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 OR52E5Q8NH55 327 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 TMEM167AQ8TBQ9 72 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 HSPB7Q9UBY9 170 aa10.75□□□□□ -0.69
PRPF18-202ENST00000378572 TNCP24821 2201 aa10.74□□□□□ -0.69
PRPF18-202ENST00000378572 LINC01548A6NM66 108 aa10.74□□□□□ -0.69
PRPF18-202ENST00000378572 C15orf61A6NNL5 157 aa10.74□□□□□ -0.69
PRPF18-202ENST00000378572 H0YIZ8 118 aa10.74□□□□□ -0.69
PRPF18-202ENST00000378572 DEDDO75618 318 aa10.74□□□□□ -0.69
PRPF18-202ENST00000378572 KBTBD11O94819 623 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms