RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 MKRN2OSH3BPM6 223 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 J3QR06 171 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 UPK2O00526 184 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 AREGP15514 252 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 IGFBP2P18065 325 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 GNG10P50151 68 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 ATP5IP56385 69 aaPredicted RBP14.9□□□□□ -0.02
TDP2-202ENST00000378198 RPL31P62899 125 aaKnown RBP14.9□□□□□ -0.02
TDP2-202ENST00000378198 PRCDQ00LT1 54 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 SPATA31B1PQ5VZV4 182 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 RPRMLQ8N4K4 120 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 PLEKHA3Q9HB20 300 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 SLC25A10Q9UBX3 287 aaPredicted RBP14.9□□□□□ -0.02
TDP2-202ENST00000378198 TP53TG5Q9Y2B4 290 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 ARL2-SNX15V9GYD0 113 aa14.9□□□□□ -0.02
TDP2-202ENST00000378198 C9JCJ5 164 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 PRSS8Q16651 343 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 GBGT1Q8N5D6 347 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 DEFB108BQ8NET1 73 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 OR4P4Q8NGL7 312 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 CCL13Q99616 98 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 HINT2Q9BX68 163 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 LINC00869P0C866 280 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 YPEL3P61236 119 aaPredicted RBP14.89□□□□□ -0.03
TDP2-202ENST00000378198 RTL8BQ17RB0 113 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 SLC25A48Q6ZT89 311 aaKnown RBP14.89□□□□□ -0.03
TDP2-202ENST00000378198 SLC35D1Q9NTN3 355 aa14.89□□□□□ -0.03
TDP2-202ENST00000378198 RPUSD1Q9UJJ7 312 aaKnown RBP14.89□□□□□ -0.03
TDP2-202ENST00000378198 YLPM1P49750 1951 aaKnown RBP14.89□□□□□ -0.03
TDP2-202ENST00000378198 FOXH1O75593 365 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 CT45A6P0DMU7 189 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 CT45A5P0DMU8 189 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 CT45A7P0DMV0 189 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 IRF2P14316 349 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 MYOD1P15172 320 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 Q6ZS92 163 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 NOL4LQ96MY1 436 aaPredicted RBP14.88□□□□□ -0.03
TDP2-202ENST00000378198 FKBP11Q9NYL4 201 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 SLC45A2Q9UMX9 530 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 TEX36Q5VZQ5 186 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 FAM216BQ8N7L0 139 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 TMEM167BQ9NRX6 74 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 IL36BQ9NZH7 164 aa14.88□□□□□ -0.03
TDP2-202ENST00000378198 hADV38S2A0JD32 116 aa14.87□□□□□ -0.03
TDP2-202ENST00000378198 A8MXE2 369 aa14.87□□□□□ -0.03
TDP2-202ENST00000378198 MMP23AO75900 390 aa14.87□□□□□ -0.03
TDP2-202ENST00000378198 CEACAM8P31997 349 aaPredicted RBP14.87□□□□□ -0.03
TDP2-202ENST00000378198 MRPL41Q8IXM3 137 aaKnown RBP14.87□□□□□ -0.03
TDP2-202ENST00000378198 SLC35E1Q96K37 410 aa14.87□□□□□ -0.03
TDP2-202ENST00000378198 NABP2Q9BQ15 211 aa14.87□□□□□ -0.03
TDP2-202ENST00000378198 ZNF705GA8MUZ8 300 aaPredicted RBP14.86□□□□□ -0.03
TDP2-202ENST00000378198 HNF1AP20823 631 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 CD40P25942 277 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 C2orf83Q53S99 150 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 MIR17HGQ75NE6 70 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 ZNF664Q8N3J9 261 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 LRFN3Q9BTN0 628 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 BET1LQ9NYM9 111 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 TEX50A0A1B0GTY4 177 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 CRYABP02511 175 aaKnown RBP14.86□□□□□ -0.03
TDP2-202ENST00000378198 ZNF90Q03938 601 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 NUP37Q8NFH4 326 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 C19orf24Q9BVV8 132 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 LINC00312Q9Y6C7 94 aa14.86□□□□□ -0.03
TDP2-202ENST00000378198 K7EN84 100 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 FAM27E3Q08E93 113 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 OR5B3Q8NH48 314 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 EAF1Q96JC9 268 aaPredicted RBP14.85□□□□□ -0.03
TDP2-202ENST00000378198 TECRQ9NZ01 308 aaKnown RBP14.85□□□□□ -0.03
TDP2-202ENST00000378198 NKX6-3A6NJ46 265 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 SRRM4A7MD48 611 aaKnown RBP14.85□□□□□ -0.03
TDP2-202ENST00000378198 A8MWP6 167 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 ACTL6BO94805 426 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 IGKV1-16P04430 117 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 ADMP35318 185 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 PSG5Q15238 335 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 IQCJQ1A5X6 159 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 PNKDQ8N490 385 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 OR1L8Q8NGR8 309 aa14.85□□□□□ -0.03
TDP2-202ENST00000378198 UNQ6494/PRO21346Q6UXR6 183 aa14.84□□□□□ -0.03
TDP2-202ENST00000378198 PQLC2Q6ZP29 291 aa14.84□□□□□ -0.03
TDP2-202ENST00000378198 ZNF833PQ6ZTB9 187 aa14.84□□□□□ -0.03
TDP2-202ENST00000378198 OSR1Q8TAX0 266 aaPredicted RBP14.84□□□□□ -0.03
TDP2-202ENST00000378198 GAL3ST2Q9H3Q3 398 aa14.84□□□□□ -0.03
TDP2-202ENST00000378198 NDUFB7P17568 137 aa14.83□□□□□ -0.03
TDP2-202ENST00000378198 TNFRSF1AP19438 455 aa14.83□□□□□ -0.03
TDP2-202ENST00000378198 SELENOTP62341 195 aa14.83□□□□□ -0.03
TDP2-202ENST00000378198 HLA-DRB5Q30154 266 aa14.83□□□□□ -0.03
TDP2-202ENST00000378198 C22orf34Q6ZV56 151 aa14.83□□□□□ -0.03
TDP2-202ENST00000378198 FAM57AQ8TBR7 257 aa14.83□□□□□ -0.03
TDP2-202ENST00000378198 SVILO95425 2214 aa14.83□□□□□ -0.04
TDP2-202ENST00000378198 CADP27708 2225 aa14.83□□□□□ -0.04
TDP2-202ENST00000378198 SAA1P0DJI8 122 aaPredicted RBP14.83□□□□□ -0.04
TDP2-202ENST00000378198 OR10J1P30954 320 aa14.83□□□□□ -0.04
TDP2-202ENST00000378198 TAS2R45P59539 299 aa14.83□□□□□ -0.04
TDP2-202ENST00000378198 MEF2CQ06413 473 aaPredicted RBP14.83□□□□□ -0.04
TDP2-202ENST00000378198 KRTCAP3Q53RY4 240 aa14.83□□□□□ -0.04
TDP2-202ENST00000378198 IGKV1OR2-108A0A075B7D4 117 aa14.82□□□□□ -0.04
TDP2-202ENST00000378198 HELTA6NFD8 242 aa14.82□□□□□ -0.04
TDP2-202ENST00000378198 SLC17A3O00476 420 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms