RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 C18orf12Q96KH6 178 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 RP1P56715 2156 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 MGAMO43451 1857 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 SAA2-SAA4A0A096LPE2 208 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 BGLAPP02818 100 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 PSMB2P49721 201 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 ARG2P78540 354 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 KLRD1Q13241 179 aa9.96□□□□□ -0.82
NPHP4-202ENST00000378161 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 LAMTOR5O43504 91 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 YPEL1O60688 119 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 COX8AP10176 69 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 CFHR2P36980 270 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 KIR2DL1P43626 348 aaPredicted RBP9.95□□□□□ -0.82
NPHP4-202ENST00000378161 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 FHL5Q5TD97 284 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 GAPTQ8N292 157 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 TMEM116Q8NCL8 245 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 YPEL2Q96QA6 119 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 K7EQS6 105 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 PRSS1P07477 247 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 ERVK-16P61578 105 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 RPL8P62917 257 aaKnown RBP9.95□□□□□ -0.82
NPHP4-202ENST00000378161 ZP4Q12836 540 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 YRDCQ86U90 279 aaKnown RBP9.95□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF525Q8N782 197 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF721Q8TF20 911 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 CDX2Q99626 313 aaPredicted RBP9.95□□□□□ -0.82
NPHP4-202ENST00000378161 VDAC2P45880 294 aaPredicted RBP9.95□□□□□ -0.82
NPHP4-202ENST00000378161 LGALS4P56470 323 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 WFDC2Q14508 124 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 PRR31Q5SQ13 230 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 SLC23A3Q6PIS1 610 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 DUSP13Q9UII6 198 aa9.95□□□□□ -0.82
NPHP4-202ENST00000378161 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 A8MWV9 139 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 PRR32B1ATL7 298 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 ACTL6BO94805 426 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 OSR2Q8N2R0 312 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF611Q8N823 705 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 SPAG8Q99932 426 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-202ENST00000378161 CFHR5Q9BXR6 569 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 TMEM167BQ9NRX6 74 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 FBLN5Q9UBX5 448 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 C5orf49A4QMS7 147 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 CEACAM4O75871 244 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 DHRS3O75911 302 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 CELA2BP08218 269 aaPredicted RBP9.94□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF137PP52743 207 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 MZT1Q08AG7 82 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 OR4C13Q8NGP0 309 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 PPDPFLQ8WWR9 84 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 AP5S1Q9NUS5 200 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 WNT16Q9UBV4 365 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 TMSB15BA0A087X1C1 80 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 FOXS1O43638 330 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 IZUMO4Q1ZYL8 232 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 TDHQ8IZJ6 230 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 C8orf44Q96CB5 159 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
NPHP4-202ENST00000378161 FABP5P3A8MUU1 101 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 FNDC10F2Z333 226 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 LMX1BO60663 402 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 EVI2AP22794 236 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 GNB1P62873 340 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 RNPS1Q15287 305 aaKnown RBP9.93□□□□□ -0.82
NPHP4-202ENST00000378161 PSMG4Q5JS54 123 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 WDR90Q96KV7 1748 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 TSPAN13O95857 204 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 IGHV3-7P01780 117 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 ZFP36L1Q07352 338 aaKnown RBP9.93□□□□□ -0.82
NPHP4-202ENST00000378161 Q1RN00 199 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 NRN1LQ496H8 165 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 H2BFWTQ7Z2G1 175 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 RCHY1Q96PM5 261 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 RABAC1Q9UI14 185 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 CASP8AP2Q9UKL3 1982 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 H0YJW9 148 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 IGFBP3P17936 291 aaPredicted RBP9.93□□□□□ -0.82
NPHP4-202ENST00000378161 ZNF502Q8TBZ5 544 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 CHCHD1Q96BP2 118 aaKnown RBP9.93□□□□□ -0.82
NPHP4-202ENST00000378161 TSC2P49815 1807 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 A8MWL6 223 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 H3BMG7 143 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 J3KT08 172 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 CENPWQ5EE01 88 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 OR4F17Q8NGA8 305 aa9.93□□□□□ -0.82
NPHP4-202ENST00000378161 TMPRSS2O15393 492 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPHP4-202ENST00000378161 RPP25LQ8N5L8 163 aaKnown RBP9.92□□□□□ -0.82
NPHP4-202ENST00000378161 AHCTF1Q8WYP5 2266 aa9.92□□□□□ -0.82
NPHP4-202ENST00000378161 TRAV8-1A0A0A6YYK1 113 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms