RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 CUBNO60494 3623 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 MSGN1A6NI15 193 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 L7N2F9 121 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 HILS1P60008 231 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 VAMP2P63027 116 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 SSBP2P81877 361 aaPredicted RBP10.26□□□□□ -0.77
CBWD3-203ENST00000377344 PRCDQ00LT1 54 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 OR10W1Q8NGF6 305 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
CBWD3-203ENST00000377344 HEYLQ9NQ87 328 aaPredicted RBP10.26□□□□□ -0.77
CBWD3-203ENST00000377344 TET2Q6N021 2002 aaPredicted RBP10.25□□□□□ -0.77
CBWD3-203ENST00000377344 NSD1Q96L73 2696 aaPredicted RBP10.25□□□□□ -0.77
CBWD3-203ENST00000377344 MAST4O15021 2626 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 TRIM77I1YAP6 450 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
CBWD3-203ENST00000377344 NDPQ00604 133 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
CBWD3-203ENST00000377344 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 TCTE3Q8IZS6 198 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 HIPK2Q9H2X6 1198 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 OR5AC2Q9NZP5 309 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 MBD2Q9UBB5 411 aa10.25□□□□□ -0.77
CBWD3-203ENST00000377344 TNCP24821 2201 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 FXYD6-FXYD2A0A087WZ82 144 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 TRAV14DV4A0A0A6YYC5 116 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 A0A1B0GW64 132 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 A0A1W2PN81 502 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 CGB1A6NKQ9 187 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 LINC01548A6NM66 108 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 DEDDO75618 318 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 CHRNA7P36544 502 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 DCUN1D4Q92564 292 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
CBWD3-203ENST00000377344 PLXNB1O43157 2135 aa10.24□□□□□ -0.77
CBWD3-203ENST00000377344 H0YIZ8 118 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 H3BP45 60 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 CLDN34H7C241 214 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 ATP6V0E1O15342 81 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 TCF21O43680 179 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 REG1AP05451 166 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 OR13C7P0DN81 318 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 PDLIM3Q53GG5 364 aaPredicted RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 PRSS54Q6PEW0 395 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 Q6ZS46 218 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 CIB3Q96Q77 187 aaPredicted RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 RAB40CQ96S21 281 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 PRSS22Q9GZN4 317 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 PSENENQ9NZ42 101 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 FBXO7Q9Y3I1 522 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 TEX22C9J3V5 150 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 KCNAB3O43448 404 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 IFNA10P01566 189 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 CRYBA1P05813 215 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 AREGP15514 252 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 SNCAP37840 140 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 CAV2P51636 162 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 RPL23AP62750 156 aaKnown RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 UBA52P62987 128 aaKnown RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 ERHP84090 104 aaKnown RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 WT1-ASQ06250 92 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 ECSCRQ19T08 205 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 SPANXN5Q5MJ07 72 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 MRPL41Q8IXM3 137 aaKnown RBP10.23□□□□□ -0.77
CBWD3-203ENST00000377344 LFNGQ8NES3 379 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 RNF126Q9BV68 326 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
CBWD3-203ENST00000377344 E5RGE8 158 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 G3V3Q6 166 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 TMEM50AO95807 157 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 IGHG2P01859 326 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 RNASE1P07998 156 aaKnown RBP10.22□□□□□ -0.77
CBWD3-203ENST00000377344 VDAC2P45880 294 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-203ENST00000377344 ZFP69Q49AA0 526 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 SGMS2Q8NHU3 365 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 WSB1Q9Y6I7 421 aa10.22□□□□□ -0.77
CBWD3-203ENST00000377344 IGLC7A0M8Q6 106 aa10.21□□□□□ -0.77
CBWD3-203ENST00000377344 EGR2P11161 476 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-203ENST00000377344 PAX9P55771 341 aa10.21□□□□□ -0.77
CBWD3-203ENST00000377344 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.77
CBWD3-203ENST00000377344 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.77
CBWD3-203ENST00000377344 HSD17B13Q7Z5P4 300 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-203ENST00000377344 ZNF546Q86UE3 836 aa10.21□□□□□ -0.77
CBWD3-203ENST00000377344 TAF15Q92804 592 aaKnown RBP eCLIP10.21□□□□□ -0.77
CBWD3-203ENST00000377344 SMIM8Q96KF7 97 aa10.21□□□□□ -0.77
CBWD3-203ENST00000377344 G3V318 75 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 C1QBP02746 253 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 SLC25A4P12235 298 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 RPP30P78346 268 aaKnown RBP10.21□□□□□ -0.78
CBWD3-203ENST00000377344 TMEM267Q0VDI3 215 aaPredicted RBP10.21□□□□□ -0.78
CBWD3-203ENST00000377344 OR2C3Q8N628 320 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 SLC24A4Q8NFF2 622 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 OR11H4Q8NGC9 324 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.78
CBWD3-203ENST00000377344 ZNF702PQ9H963 129 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 ZC4H2Q9NQZ6 224 aa10.21□□□□□ -0.78
CBWD3-203ENST00000377344 STRAPQ9Y3F4 350 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms