RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
HDAC6-204ENST00000376643 MFSD2BA6NFX1 497 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 MARCH11A6NNE9 402 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 UBE2CO00762 179 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 TGOLN2O43493 480 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 XRCC3O43542 346 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 SCAF4O95104 1147 aaKnown RBP11.06□□□□□ -0.64
HDAC6-204ENST00000376643 ZNF585BQ52M93 769 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 ZNF818PQ6ZRF7 136 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 OR5H6Q8NGV6 325 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 TMEM56Q96MV1 263 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-204ENST00000376643 C6orf62Q9GZU0 229 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-204ENST00000376643 WFDC10AQ9H1F0 79 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 VCX3AQ9NNX9 186 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 EHFQ9NZC4 300 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 S4R3C0 116 aa11.06□□□□□ -0.64
HDAC6-204ENST00000376643 NDUFA4O00483 81 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 ATP6V1G2O95670 118 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 SERPINE2P07093 398 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 F2RP25116 425 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 TM4SF20Q53R12 229 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 UBE2NLQ5JXB2 153 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 LPCAT3Q6P1A2 487 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 DHRS11Q6UWP2 260 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 C19orf35Q6ZS72 473 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 Q6ZWC4 215 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 TMEM217Q8N7C4 229 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 OR5H2Q8NGV7 314 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 OR5B3Q8NH48 314 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 MOB3AQ96BX8 217 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 FAM212BQ9NTI7 297 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-204ENST00000376643 PRNDQ9UKY0 176 aa11.05□□□□□ -0.64
HDAC6-204ENST00000376643 OR4C46A6NHA9 309 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 TSPAN4O14817 238 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 S1PR2O95136 353 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 OR13C7P0DN81 318 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 GNRHRP30968 328 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 BMI1P35226 326 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 CMC4P56277 68 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-204ENST00000376643 KCTD21Q4G0X4 260 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 TMEM69Q5SWH9 247 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 SLC25A24Q6NUK1 477 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 OR6F1Q8NGZ6 308 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-204ENST00000376643 C21orf62Q9NYP8 219 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 F11RQ9Y624 299 aaKnown RBP11.04□□□□□ -0.64
HDAC6-204ENST00000376643 RYR2Q92736 4967 aa11.04□□□□□ -0.64
HDAC6-204ENST00000376643 KIR2DL5BA0A0G2JN68 375 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 KIR2DL5BA0A0G2JPC4 375 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 NUPR2A6NF83 97 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 K7EMT4 169 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 GPR31O00270 319 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 RLN1P04808 185 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 CLEC2LP0C7M8 214 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 PTHLHP12272 177 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-204ENST00000376643 EDN2P20800 178 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-204ENST00000376643 NEDD8Q15843 81 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 KIR2DL5AQ8N109 375 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 KIR2DL5BQ8NHK3 375 aa11.03□□□□□ -0.64
HDAC6-204ENST00000376643 DGCR14Q96DF8 476 aaKnown RBP11.03□□□□□ -0.64
HDAC6-204ENST00000376643 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 C15orf62A8K5M9 175 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 PGLYRP1O75594 196 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-204ENST00000376643 STPG3Q8N7X2 389 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 OVOL2Q9BRP0 275 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 NDUFA4L2Q9NRX3 87 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 OR51B2Q9Y5P1 312 aa11.02□□□□□ -0.65
HDAC6-204ENST00000376643 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 TEX50A0A1B0GTY4 177 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 CXorf65A6NEN9 183 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 NUPL2O15504 423 aaKnown RBP11.01□□□□□ -0.65
HDAC6-204ENST00000376643 SPRY2O43597 315 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 CD5P06127 495 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 PRSS3P35030 304 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 Q56UQ5 140 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 OR10W1Q8NGF6 305 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 OR1P1Q8NH06 330 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 RNF167Q9H6Y7 350 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 ANAPC10Q9UM13 185 aa11.01□□□□□ -0.65
HDAC6-204ENST00000376643 STARD9Q9P2P6 4700 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 IGHV3-35A0A0C4DH35 117 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 SMIM31A0A1B0GVY4 71 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 KRASP01116 189 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 FCER2P06734 321 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 NAT1P18440 290 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 LPAR6P43657 344 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 TAS2R20P59543 309 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 TSPAN5P62079 268 aa11□□□□□ -0.65
HDAC6-204ENST00000376643 TNFRSF9Q07011 255 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms