RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 YPEL2Q96QA6 119 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 HINT2Q9BX68 163 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 CGAP01215 116 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 IL6RP08887 468 aaPredicted RBP12.5□□□□□ -0.41
MSH5-203ENST00000375750 CRISP2P16562 243 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 GCHFRP30047 84 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 OPRK1P41145 380 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 OR4P4Q8NGL7 312 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 STARD4Q96DR4 205 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 PPIAL4AQ9Y536 164 aa12.5□□□□□ -0.41
MSH5-203ENST00000375750 FCN1O00602 326 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 GATA2P23769 480 aaPredicted RBP12.49□□□□□ -0.41
MSH5-203ENST00000375750 TCL1AP56279 114 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
MSH5-203ENST00000375750 FXYD3Q14802 87 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 LRRC29Q8WV35 223 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 PLSCR4Q9NRQ2 329 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 CXorf1O96002 111 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 RELBQ01201 579 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 EFNB3Q15768 340 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 BAGE3Q86Y29 109 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 OR8I2Q8N0Y5 310 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 ZNRF1Q8ND25 227 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 RAB1CQ92928 201 aa12.49□□□□□ -0.41
MSH5-203ENST00000375750 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
MSH5-203ENST00000375750 FAM201AQ5SY85 155 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 DOLPP1Q86YN1 238 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 STPG3Q8N7X2 389 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 DUSP13Q9UII6 198 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 FAM215AQ9Y5M1 114 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 SNURFLB1AK76 121 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 SPINT2O43291 252 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 NPSP0C0P6 89 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 IGFBP2P18065 325 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 MORN2Q502X0 79 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
MSH5-203ENST00000375750 CXXC4Q9H2H0 198 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 TCF19Q9Y242 345 aa12.48□□□□□ -0.41
MSH5-203ENST00000375750 CRYABP02511 175 aaKnown RBP12.47□□□□□ -0.41
MSH5-203ENST00000375750 PRDX2P32119 198 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 TFPI2P48307 235 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 TBR1Q16650 682 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 IL36BQ9NZH7 164 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 MBD3L4A6NDZ8 208 aaPredicted RBP12.47□□□□□ -0.41
MSH5-203ENST00000375750 MBD3L3A6NE82 208 aaPredicted RBP12.47□□□□□ -0.41
MSH5-203ENST00000375750 MBD3L5A6NJ08 208 aaPredicted RBP12.47□□□□□ -0.41
MSH5-203ENST00000375750 TPPP2P59282 170 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 MLANAQ16655 118 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 WDR31Q8NA23 367 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 MBD3L2Q8NHZ7 208 aaPredicted RBP12.47□□□□□ -0.41
MSH5-203ENST00000375750 FAM216AQ8WUB2 273 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 FBXL7Q9UJT9 491 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 K7ENP7 123 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 CRYBB3P26998 211 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 INO80CQ6PI98 192 aaPredicted RBP12.47□□□□□ -0.41
MSH5-203ENST00000375750 MMD2Q8IY49 270 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
MSH5-203ENST00000375750 RP1L1Q8IWN7 2480 aaPredicted RBP12.46□□□□□ -0.41
MSH5-203ENST00000375750 IGKV1D-17A0A075B6S4 117 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 COMPP49747 757 aaPredicted RBP12.46□□□□□ -0.41
MSH5-203ENST00000375750 LGALS4P56470 323 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 KRTDAPP60985 99 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 DUX4L9Q6RFH8 374 aaPredicted RBP12.46□□□□□ -0.41
MSH5-203ENST00000375750 OR2Z1Q8NG97 314 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 EAF1Q96JC9 268 aaPredicted RBP12.46□□□□□ -0.41
MSH5-203ENST00000375750 TMEM68Q96MH6 324 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 TMEM208Q9BTX3 173 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 GNB4Q9HAV0 340 aa12.46□□□□□ -0.41
MSH5-203ENST00000375750 HOXC12P31275 282 aa12.46□□□□□ -0.42
MSH5-203ENST00000375750 SELENOTP62341 195 aa12.46□□□□□ -0.42
MSH5-203ENST00000375750 MSMPQ1L6U9 139 aa12.46□□□□□ -0.42
MSH5-203ENST00000375750 RCHY1Q96PM5 261 aa12.46□□□□□ -0.42
MSH5-203ENST00000375750 ZNRD1Q9P1U0 126 aa12.46□□□□□ -0.42
MSH5-203ENST00000375750 LSM4Q9Y4Z0 139 aaKnown RBP12.46□□□□□ -0.42
MSH5-203ENST00000375750 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.45□□□□□ -0.42
MSH5-203ENST00000375750 CA2P00918 260 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 CECR9P0C854 216 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 V9GYV3 84 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 OR10J4P0C629 311 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 ERVK-16P61578 105 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 SMIM21Q3B7S5 101 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 FAM90A1Q86YD7 464 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 Q8NA96 180 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 OR5AU1Q8NGC0 362 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 S1PR3Q99500 378 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 IFI27L2Q9H2X8 130 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
MSH5-203ENST00000375750 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
MSH5-203ENST00000375750 PSG5Q15238 335 aa12.44□□□□□ -0.42
MSH5-203ENST00000375750 TMEM249Q2WGJ8 235 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms