RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NPCDR1Q9BY65 106 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 SELENOVP59797 346 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 SCCPDHQ8NBX0 429 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 ZNF439Q8NDP4 499 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 FGFBP3Q8TAT2 258 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 TRIB1Q96RU8 372 aa10.14□□□□□ -0.79
C9orf3-203ENST00000375315 FRMD6-AS1P0C7T7 363 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 Q5PR19 223 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 BATF2Q8N1L9 274 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 GAGE10A6NGK3 116 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 ZNF716A6NP11 495 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 HSBP1O75506 76 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 VAMP5O95183 116 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 IGLC1P0CG04 106 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 UBE2G1P62253 170 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 TFF3Q07654 80 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 MUC21Q5SSG8 566 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 PRSS57Q6UWY2 283 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 S100A7AQ86SG5 101 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 OR2AE1Q8NHA4 323 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 SARAFQ96BY9 339 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 ARHGAP21Q5T5U3 1957 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 DIDO1Q9BTC0 2240 aaKnown RBP10.13□□□□□ -0.79
C9orf3-203ENST00000375315 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 IGKV1-5P01602 117 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 OTX1P32242 354 aaPredicted RBP10.13□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM136Q6ZRR5 245 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 GTF2H5Q6ZYL4 71 aa10.13□□□□□ -0.79
C9orf3-203ENST00000375315 IGKV1-39P01597 117 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 IGKV1D-39P04432 117 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 DEFA4P12838 97 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 RAB1CQ92928 201 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 OR2W1Q9Y3N9 320 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 INTS1Q8N201 2190 aaKnown RBP10.12□□□□□ -0.79
C9orf3-203ENST00000375315 A0A1B0GV72 72 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 CX3CL1P78423 397 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 TGFBR3Q03167 851 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 PSG7Q13046 419 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 TBR1Q16650 682 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 RSPO1Q2MKA7 263 aaPredicted RBP10.12□□□□□ -0.79
C9orf3-203ENST00000375315 SLC25A34Q6PIV7 304 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 ZADH2Q8N4Q0 377 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 ATP23Q9Y6H3 246 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 LY96Q9Y6Y9 160 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 ACACBO00763 2458 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 ADGRG4Q8IZF6 3080 aa10.12□□□□□ -0.79
C9orf3-203ENST00000375315 TRAV8-6A0A0B4J262 113 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A10PA6NDY2 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A18PA6NE21 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A16PA6NEW6 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A20PA6NIJ5 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A8PA6NJQ4 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A7PA6NKC0 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A22PA8MWA6 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A12PA8MX19 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A5PA8MXJ8 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A23PA8MXZ1 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 M0R2Z0 102 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 BMPR1BO00238 502 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 SPINK4O60575 86 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A15PP0C7V4 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A13PP0C7W8 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A14PP0C7W9 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FAM90A24PP0C7X0 464 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 ZNF32P17041 273 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FKBP2P26885 142 aaKnown RBP10.11□□□□□ -0.79
C9orf3-203ENST00000375315 LGALS7P47929 136 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 OR1B1Q8NGR6 318 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 NEUROG1Q92886 237 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 TAAR6Q96RI8 345 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 MED12LQ86YW9 2145 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 KIAA1549Q9HCM3 1950 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 SPTBN1Q01082 2364 aaKnown RBP10.11□□□□□ -0.79
C9orf3-203ENST00000375315 AHRRA9YTQ3 701 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 AMY1AP04745 511 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 SCGB1A1P11684 91 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 OR8B3Q8NGG8 313 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 OR1L1Q8NH94 360 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 ST6GALNAC6Q969X2 333 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 OR8B2Q96RD0 313 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 FOXB1Q99853 325 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 K7EN84 100 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 ZNF16P17020 682 aaPredicted RBP10.11□□□□□ -0.79
C9orf3-203ENST00000375315 TMEM108Q6UXF1 575 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 SLC25A40Q8TBP6 338 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 ABHD17AQ96GS6 310 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 LIN7CQ9NUP9 197 aaKnown RBP10.11□□□□□ -0.79
C9orf3-203ENST00000375315 V9GYV3 84 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 NBEAQ8NFP9 2946 aa10.11□□□□□ -0.79
C9orf3-203ENST00000375315 TRAV38-1A0A0B4J264 116 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 TRAV17A0A0B4J275 112 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 RAB29O14966 203 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 APCSP02743 223 aa10.1□□□□□ -0.79
C9orf3-203ENST00000375315 FAM87AP0C7U9 286 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms