RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 HINT2Q9BX68 163 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 COMMD5Q9GZQ3 224 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ARHGAP32A7KAX9 2087 aa14.55□□□□□ -0.08
HLA-DQB1-201ENST00000374943 IGHV1-3A0A0C4DH29 117 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 CTXND1A0A1B0GTU2 59 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 MAP1LC3B2A6NCE7 125 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 HSPB1P04792 205 aaKnown RBP14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ICAM4Q14773 271 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 KHDC3LQ587J8 217 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OR11H6Q8NGC7 330 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 MAP1LC3BQ9GZQ8 125 aa14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 LSM4Q9Y4Z0 139 aaKnown RBP14.54□□□□□ -0.08
HLA-DQB1-201ENST00000374943 LOC102723971A0A1B0GUV8 181 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 A0A1W2PN81 502 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OVOL3O00110 214 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 COX7A1P24310 79 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 CHRNA7P36544 502 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OPRK1P41145 380 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 DLX1P56177 255 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 LCN15Q6UWW0 184 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 C1orf122Q6ZSJ8 110 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 KIR3DL3Q8N743 410 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 TEX45Q8NA69 505 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OR10G4Q8NGN3 311 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OR10G9Q8NGN4 311 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 OR10G7Q8NGN6 311 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 NPVFQ9HCQ7 196 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 KCNIP2Q9NS61 270 aa14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 TMA7Q9Y2S6 64 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SMCO3A2RU48 225 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 NPBWR1P48145 328 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 HAGHQ16775 308 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ACOT6Q3I5F7 207 aaPredicted RBP14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ARSJQ5FYB0 599 aaPredicted RBP14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 PNKDQ8N490 385 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 CLRN3Q8NCR9 226 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 ZNF430Q9H8G1 570 aaPredicted RBP14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 UNKLQ9H9P5 680 aaKnown RBP14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 SLC39A9Q9NUM3 307 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 INSIG2Q9Y5U4 225 aa14.52□□□□□ -0.08
HLA-DQB1-201ENST00000374943 NDUFS7O75251 213 aa14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SRP19P09132 144 aaKnown RBP14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PRTN3P24158 256 aa14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RPEQ96AT9 228 aa14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MGST2Q99735 147 aa14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 GGTLC1Q9BX51 225 aa14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ACTR3CQ9C0K3 210 aaPredicted RBP14.52□□□□□ -0.09
HLA-DQB1-201ENST00000374943 FAM74A7A6NL05 159 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SEC14L6B5MCN3 397 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SLC25A17O43808 307 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 OPN1MWP04001 364 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CRYGBP07316 175 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 OPN1MW2P0DN77 364 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 OPN1MW3P0DN78 364 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 BCL2P10415 239 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 HNF4GQ14541 408 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MRGPRG-AS1Q2M3A8 158 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 FAM74A3Q4VXF1 159 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 IGFBPL1Q8WX77 278 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 C1orf159Q96HA4 380 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RNF5Q99942 180 aa14.51□□□□□ -0.09
HLA-DQB1-201ENST00000374943 DOPEY1Q5JWR5 2465 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 A0A1W2PPI3 338 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CGB1A6NKQ9 187 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ODF3BA8MYP8 253 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CYB5BO43169 146 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 IFNA1P01562 189 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 IGHV2-5P01817 119 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ARF6P62330 175 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ERHP84090 104 aaKnown RBP14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 TPTE2P1Q5T6R2 138 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RITA1Q96K30 269 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 GNG13Q9P2W3 67 aa14.5□□□□□ -0.09
HLA-DQB1-201ENST00000374943 IGHV3-72A0A0B4J1Y9 119 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 ENSAO43768 121 aaKnown RBP14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 FGF8P55075 233 aaPredicted RBP14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 PRB3Q04118 309 aaPredicted RBP14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SOHLH1Q5JUK2 328 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 HCP5Q6MZN7 132 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 TEPPQ6URK8 271 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MOB3BQ86TA1 216 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MMD2Q8IY49 270 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 OR10W1Q8NGF6 305 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SLC25A22Q9H936 323 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 NAV3Q8IVL0 2385 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MAST4O15021 2626 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 OR13C7P0DN81 318 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 HTR1DP28221 377 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 MAS1LP35410 378 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 TMEM249Q2WGJ8 235 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 FAM122CQ6P4D5 195 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 RXFP4Q8TDU9 374 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 SIRT7Q9NRC8 400 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 DPM3Q9P2X0 92 aa14.49□□□□□ -0.09
HLA-DQB1-201ENST00000374943 E7EUB6 86 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 NDUFS6O75380 124 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 YIF1AO95070 293 aa14.48□□□□□ -0.09
HLA-DQB1-201ENST00000374943 CDC34P49427 236 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms