RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RHOBP62745 196 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 EFNB3Q15768 340 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 COL5A1-AS1Q5SY13 56 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 CBY1Q9Y3M2 126 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 MT-CO2P00403 227 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 CGAP01215 116 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 DUTP33316 252 aaKnown RBP9.16□□□□□ -0.94
CCDC40-203ENST00000374877 SUMO1P63165 101 aaKnown RBP9.16□□□□□ -0.94
CCDC40-203ENST00000374877 FXYD3Q14802 87 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 MMDQ15546 238 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 DOLPP1Q86YN1 238 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 STPG3Q8N7X2 389 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 DEFB127Q9H1M4 99 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 CHODLQ9H9P2 273 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 FZR1Q9UM11 496 aa9.16□□□□□ -0.94
CCDC40-203ENST00000374877 LYZL6O75951 148 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 LINC00614P0C842 121 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 RAB7AP51149 207 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 Q0VG73 95 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 GABRA6Q16445 453 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 TBR1Q16650 682 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 ACP7Q6ZNF0 438 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 C11orf42Q8N5U0 333 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 WDR31Q8NA23 367 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 OR4B1Q8NGF8 309 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 Q8TCH9 128 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 HES4Q9HCC6 221 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 NPVFQ9HCQ7 196 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 SPRR3Q9UBC9 169 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-203ENST00000374877 SIAH2O43255 324 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 GPX1P07203 203 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 GNG4P50150 75 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 RPL39P5Q59GN2 51 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 CENPWQ5EE01 88 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 KLF14Q8TD94 323 aaPredicted RBP9.15□□□□□ -0.94
CCDC40-203ENST00000374877 STARD4Q96DR4 205 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 TXN2Q99757 166 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 HINT2Q9BX68 163 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 NRN1Q9NPD7 142 aa9.15□□□□□ -0.94
CCDC40-203ENST00000374877 IQCF6A8MYZ5 107 aa9.15□□□□□ -0.95
CCDC40-203ENST00000374877 TCF21O43680 179 aa9.15□□□□□ -0.95
CCDC40-203ENST00000374877 PROP1O75360 226 aa9.15□□□□□ -0.95
CCDC40-203ENST00000374877 VDAC2P45880 294 aaPredicted RBP9.15□□□□□ -0.95
CCDC40-203ENST00000374877 MRPS11P82912 194 aaKnown RBP9.15□□□□□ -0.95
CCDC40-203ENST00000374877 PQLC2Q6ZP29 291 aa9.15□□□□□ -0.95
CCDC40-203ENST00000374877 RBMXL3Q8N7X1 1067 aaKnown RBP9.15□□□□□ -0.95
CCDC40-203ENST00000374877 RNF2Q99496 336 aa9.15□□□□□ -0.95
CCDC40-203ENST00000374877 RNASE7Q9H1E1 156 aaKnown RBP9.15□□□□□ -0.95
CCDC40-203ENST00000374877 V9GYV3 84 aa9.15□□□□□ -0.95
CCDC40-203ENST00000374877 TRAV34A0A0B4J273 112 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 ZNF253O75346 499 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 CRYBB3P26998 211 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 CHRNB4P30926 498 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 TEPPQ6URK8 271 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 TMEM140Q9NV12 185 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 TCF19Q9Y242 345 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 TRGV10A0A0A0MS01 117 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 C9JCJ5 164 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 RPL19P84098 196 aaKnown RBP9.14□□□□□ -0.95
CCDC40-203ENST00000374877 PSG5Q15238 335 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 MRPL54Q6P161 138 aaKnown RBP9.14□□□□□ -0.95
CCDC40-203ENST00000374877 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 GCNT2Q8N0V5 402 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 GNB1LQ9BYB4 327 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 DNAJC4Q9NNZ3 241 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 GCM1Q9NP62 436 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 TUBG2Q9NRH3 451 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 HELTA6NFD8 242 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 PRSS46E5RG02 174 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 CRYABP02511 175 aaKnown RBP9.14□□□□□ -0.95
CCDC40-203ENST00000374877 NTF3P20783 257 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 RAB31Q13636 194 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 WDR82Q6UXN9 313 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 MIR17HGQ75NE6 70 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 S1PR3Q99500 378 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 OPN3Q9H1Y3 402 aaPredicted RBP9.14□□□□□ -0.95
CCDC40-203ENST00000374877 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
CCDC40-203ENST00000374877 TIMM8AO60220 97 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-203ENST00000374877 SRIP30626 198 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 RELBQ01201 579 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 Q6ZN92 141 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 C1orf174Q8IYL3 243 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 SARAFQ96BY9 339 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 FAM122AQ96E09 287 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 C1orf159Q96HA4 380 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 SLC35E1Q96K37 410 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 WNT10AQ9GZT5 417 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 LSM4Q9Y4Z0 139 aaKnown RBP9.13□□□□□ -0.95
CCDC40-203ENST00000374877 TET2Q6N021 2002 aaPredicted RBP9.13□□□□□ -0.95
CCDC40-203ENST00000374877 TRBV9A0A0B4J1U6 114 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 ADH4P08319 380 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 MGST1P10620 155 aaKnown RBP9.13□□□□□ -0.95
CCDC40-203ENST00000374877 IGFBP2P18065 325 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 NPY1RP25929 384 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 FABP6P51161 128 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 SMIM21Q3B7S5 101 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms