RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TCTE3Q8IZS6 198 aa13.88□□□□□ -0.19
PFDN6-201ENST00000374606 OR1L8Q8NGR8 309 aa13.88□□□□□ -0.19
PFDN6-201ENST00000374606 NEURL2Q9BR09 285 aa13.88□□□□□ -0.19
PFDN6-201ENST00000374606 HINT2Q9BX68 163 aa13.88□□□□□ -0.19
PFDN6-201ENST00000374606 MAGT1Q9H0U3 335 aa13.88□□□□□ -0.19
PFDN6-201ENST00000374606 TRRAPQ9Y4A5 3859 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 TEX50A0A1B0GTY4 177 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 CEBPZOSA8MTT3 80 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 CNIH1O95406 144 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 PSMB6P28072 239 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 HOXA1P49639 335 aaPredicted RBP13.87□□□□□ -0.19
PFDN6-201ENST00000374606 POLR2GP62487 172 aaKnown RBP eCLIP13.87□□□□□ -0.19
PFDN6-201ENST00000374606 PRCDQ00LT1 54 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 SPINK9Q5DT21 86 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 SRSF12Q8WXF0 261 aaKnown RBP13.87□□□□□ -0.19
PFDN6-201ENST00000374606 ARPC1AQ92747 370 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 DUX5Q96PT3 197 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 RBKSQ9H477 322 aa13.87□□□□□ -0.19
PFDN6-201ENST00000374606 RCL1Q9Y2P8 373 aaKnown RBP13.87□□□□□ -0.19
PFDN6-201ENST00000374606 TET2Q6N021 2002 aaPredicted RBP13.86□□□□□ -0.19
PFDN6-201ENST00000374606 SMLR1H3BR10 107 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 SYNGR2O43760 224 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 SSSCA1O60232 199 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 MPC2O95563 127 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 AMY1AP04745 511 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 CX3CL1P78423 397 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 SSBP2P81877 361 aaPredicted RBP13.86□□□□□ -0.19
PFDN6-201ENST00000374606 FXYD3Q14802 87 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 ZNF562Q6V9R5 426 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 GRPEL2Q8TAA5 225 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 ABHD5Q8WTS1 349 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 PLEKHA3Q9HB20 300 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 ENY2Q9NPA8 101 aa13.86□□□□□ -0.19
PFDN6-201ENST00000374606 IGHV7-81A0A0B4J1V7 117 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 A0A1W2PN81 502 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 SH2D7A6NKC9 451 aaPredicted RBP13.85□□□□□ -0.19
PFDN6-201ENST00000374606 GPR137BO60478 399 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 RLN2P04090 185 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 PVALBP20472 110 aaPredicted RBP13.85□□□□□ -0.19
PFDN6-201ENST00000374606 CHRNA7P36544 502 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 CD300CQ08708 224 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 C9orf152Q5JTZ5 239 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 MRPL41Q8IXM3 137 aaKnown RBP13.85□□□□□ -0.19
PFDN6-201ENST00000374606 THAP6Q8TBB0 222 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 DTD1Q8TEA8 209 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 HSPB9Q9BQS6 159 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 ZNF747Q9BV97 191 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 NPFFR1Q9GZQ6 430 aa13.85□□□□□ -0.19
PFDN6-201ENST00000374606 TRAV14DV4A0A0A6YYC5 116 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 CLDN34H7C241 214 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 L7N2F9 121 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 DEDDO75618 318 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 IAPPP10997 89 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 VAMP2P63027 116 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 NDPQ00604 133 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 DEFA6Q01524 100 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 PRSS54Q6PEW0 395 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 SHISA2Q6UWI4 295 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 CIB3Q96Q77 187 aaPredicted RBP13.84□□□□□ -0.19
PFDN6-201ENST00000374606 RAB40CQ96S21 281 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 ESM1Q9NQ30 184 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 NDUFA4L2Q9NRX3 87 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
PFDN6-201ENST00000374606 CGB1A6NKQ9 187 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 G3V3Q6 166 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 Q5BKY6 102 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 C11orf87Q6NUJ2 197 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 HIPK2Q9H2X6 1198 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 HEYLQ9NQ87 328 aaPredicted RBP13.83□□□□□ -0.2
PFDN6-201ENST00000374606 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 OR5AC2Q9NZP5 309 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 TNCP24821 2201 aa13.83□□□□□ -0.2
PFDN6-201ENST00000374606 FXYD6-FXYD2A0A087WZ82 144 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 A0A1B0GW64 132 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 E5RGE8 158 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 E7EUB6 86 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 H0YIZ8 118 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 ATP6V0E1O15342 81 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 LY86O95711 162 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 HSD17B13Q7Z5P4 300 aaPredicted RBP13.82□□□□□ -0.2
PFDN6-201ENST00000374606 SLC35E3Q7Z769 313 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 OR10W1Q8NGF6 305 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 DCUN1D4Q92564 292 aa13.82□□□□□ -0.2
PFDN6-201ENST00000374606 SRSF8Q9BRL6 282 aaKnown RBP13.82□□□□□ -0.2
PFDN6-201ENST00000374606 FAM103A1Q9BTL3 118 aaKnown RBP13.82□□□□□ -0.2
PFDN6-201ENST00000374606 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 MSGN1A6NI15 193 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 TEX22C9J3V5 150 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 C1QBP02746 253 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 RNASE1P07998 156 aaKnown RBP13.81□□□□□ -0.2
PFDN6-201ENST00000374606 SLC25A4P12235 298 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
PFDN6-201ENST00000374606 RPL23AP62750 156 aaKnown RBP13.81□□□□□ -0.2
PFDN6-201ENST00000374606 BLCAPP62952 87 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 FOXL1Q12952 345 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 ZFP69Q49AA0 526 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 ARSJQ5FYB0 599 aaPredicted RBP13.81□□□□□ -0.2
PFDN6-201ENST00000374606 PRSS22Q9GZN4 317 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 FBXO7Q9Y3I1 522 aa13.81□□□□□ -0.2
PFDN6-201ENST00000374606 WSB1Q9Y6I7 421 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms