RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 MOB3BQ86TA1 216 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 COL25A1Q9BXS0 654 aaPredicted RBP15.25■□□□□ 0.03
USP49-202ENST00000373010 CTDSP1Q9GZU7 261 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 H0YJW9 148 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 IGFBP2P18065 325 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 LOXP28300 417 aaPredicted RBP15.25■□□□□ 0.03
USP49-202ENST00000373010 SPATA31B1PQ5VZV4 182 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 STPG3Q8N7X2 389 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 NECAP1Q8NC96 275 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 LINC01560Q8TB33 94 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 HARBI1Q96MB7 349 aa15.25■□□□□ 0.03
USP49-202ENST00000373010 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.24■□□□□ 0.03
USP49-202ENST00000373010 APOA2P02652 100 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 STAG3L2P0CL84 134 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 STAG3L3P0CL85 134 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 TMEM249Q2WGJ8 235 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 SPNS3Q6ZMD2 512 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 OR10W1Q8NGF6 305 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 BET1LQ9NYM9 111 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 CHRNB4P30926 498 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 NDUFA6P56556 154 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 GNB1P62873 340 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 SLC16A13Q7RTY0 426 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 OR10X1Q8NGY0 326 aa15.24■□□□□ 0.03
USP49-202ENST00000373010 OR5T1Q8NG75 326 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 OSR1Q8TAX0 266 aaPredicted RBP15.23■□□□□ 0.03
USP49-202ENST00000373010 TMEM204Q9BSN7 226 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 SEPSECSQ9HD40 501 aaKnown RBP15.23■□□□□ 0.03
USP49-202ENST00000373010 IGHV1-69-2A0A0G2JMI3 117 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 FAM90A27PA6NNH2 459 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 CD3EP07766 207 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 GRNP28799 593 aaKnown RBP15.23■□□□□ 0.03
USP49-202ENST00000373010 APOBEC3AP31941 199 aaPredicted RBP15.23■□□□□ 0.03
USP49-202ENST00000373010 EFNB3Q15768 340 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 OR5AN1Q8NGI8 311 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 DERL1Q9BUN8 251 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 DOK5Q9P104 306 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 MSRB2Q9Y3D2 182 aa15.23■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BKO60814 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 NDUFS6O75380 124 aaKnown RBP15.22■□□□□ 0.03
USP49-202ENST00000373010 S100A8P05109 93 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BJP06899 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BOP23527 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BBP33778 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 DLX6P56179 175 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BDP58876 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BCP62807 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 MLANAQ16655 118 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST2H2BEQ16778 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BHQ93079 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BNQ99877 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 HIST1H2BMQ99879 126 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 KCNIP2Q9NS61 270 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 IGF2RP11717 2491 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 LYNX1G3V0Z9 82 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 CLN5O75503 358 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 CXorf1O96002 111 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 LYNX1P0DP58 116 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 NABP2Q9BQ15 211 aa15.22■□□□□ 0.03
USP49-202ENST00000373010 AURKAIP1Q9NWT8 199 aaPredicted RBP15.22■□□□□ 0.03
USP49-202ENST00000373010 TRBV24-1A0A075B6N3 115 aa15.21■□□□□ 0.03
USP49-202ENST00000373010 NDUFB4O95168 129 aa15.21■□□□□ 0.03
USP49-202ENST00000373010 RPL29P47914 159 aaKnown RBP15.21■□□□□ 0.03
USP49-202ENST00000373010 RAB31Q13636 194 aa15.21■□□□□ 0.03
USP49-202ENST00000373010 TMEM177Q53S58 311 aa15.21■□□□□ 0.03
USP49-202ENST00000373010 FLYWCH2Q96CP2 140 aaKnown RBP15.21■□□□□ 0.03
USP49-202ENST00000373010 ELOVL1Q9BW60 279 aa15.21■□□□□ 0.03
USP49-202ENST00000373010 FKBP11Q9NYL4 201 aa15.21■□□□□ 0.03
USP49-202ENST00000373010 E7EUB6 86 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 H7BYZ3 331 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 PDE6DO43924 150 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 FOXH1O75593 365 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 PFN1P07737 140 aaKnown RBP15.21■□□□□ 0.02
USP49-202ENST00000373010 LINC00869P0C866 280 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 RNASE2P10153 161 aaKnown RBP15.21■□□□□ 0.02
USP49-202ENST00000373010 OR5B3Q8NH48 314 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 NANPQ8TBE9 248 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 FRZBQ92765 325 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 KAAG1Q9UBP8 84 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 RAXQ9Y2V3 346 aa15.21■□□□□ 0.02
USP49-202ENST00000373010 IGKV1OR2-108A0A075B7D4 117 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 HOXA5P20719 270 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 PRR20EP86478 221 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 PRR20CP86479 221 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 PRR20DP86480 221 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 PRR20BP86481 221 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 PRR20AP86496 221 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 CLEC12BQ2HXU8 276 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 TMEM155Q4W5P6 130 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 COMMD5Q9GZQ3 224 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 SPTA1P02549 2419 aa15.2■□□□□ 0.02
USP49-202ENST00000373010 B9A039 149 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 ACTL6BO94805 426 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 GCHFRP30047 84 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 RHOBP62745 196 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 RPL8P62917 257 aaKnown RBP15.19■□□□□ 0.02
USP49-202ENST00000373010 C4orf17Q53FE4 359 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 C2orf83Q53S99 150 aa15.19■□□□□ 0.02
USP49-202ENST00000373010 ST6GALNAC6Q969X2 333 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms