RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 GNG5P63218 68 aa20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 MRPL20Q9BYC9 149 aaKnown RBP20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 IL36BQ9NZH7 164 aa20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 WDYHV1Q96HA8 205 aa20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 TRBV9A0A0B4J1U6 114 aa20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 NRXN2Q9P2S2 1712 aa20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 OR13C6PQ8NH95 151 aa20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 PSMG3Q9BT73 122 aaPredicted RBP20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 CARHSP1Q9Y2V2 147 aaKnown RBP20.18■□□□□ 0.82
RAPGEF1-203ENST00000372195 TMEM106BQ9NUM4 274 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 CD55P08174 381 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 TMEM70Q9BUB7 260 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 BSPH1Q075Z2 132 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 LINC00587B1AMM8 73 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 NBEAP1P0C6P0 100 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 IGHV1-2P23083 117 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 BTCP35070 178 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 CLDND2Q8NHS1 167 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 CFHR5Q9BXR6 569 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 GEMIN7Q9H840 131 aaKnown RBP20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 UCNP55089 124 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 ZNF414Q96IQ9 312 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 PRELID3AQ96N28 172 aa20.17■□□□□ 0.82
RAPGEF1-203ENST00000372195 SMAGPQ0VAQ4 97 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 PLPPR1Q8TBJ4 325 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 MRPL16Q9NX20 251 aaKnown RBP20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 SFTPCP11686 197 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 A8MXK9 166 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 PLSCR2Q9NRY7 297 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 MDC1Q14676 2089 aaKnown RBP20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 IFI6P09912 130 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 CD69Q07108 199 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 NDUFA3O95167 84 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 HOXB1P14653 301 aaPredicted RBP20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 RNASE4P34096 147 aaKnown RBP20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 TBR1Q16650 682 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 GATAD1Q8WUU5 269 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 LYZL4Q96KX0 146 aa20.16■□□□□ 0.82
RAPGEF1-203ENST00000372195 RNASE7Q9H1E1 156 aaKnown RBP20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 PEX7O00628 323 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 GPR183P32249 361 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 CLEC19AQ6UXS0 136 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 SELENOKQ9Y6D0 94 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 JOSD1Q15040 202 aaPredicted RBP20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 DNM1P46Q6ZS02 220 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 DPH3Q96FX2 82 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 MESP1Q9BRJ9 268 aa20.15■□□□□ 0.82
RAPGEF1-203ENST00000372195 KIR2DL4Q99706 377 aa20.14■□□□□ 0.82
RAPGEF1-203ENST00000372195 PRR31Q5SQ13 230 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 FBXL7Q9UJT9 491 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 RAMP3O60896 148 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 CD24P25063 80 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 PSG7Q13046 419 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 LOXL4Q96JB6 756 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 C19orf24Q9BVV8 132 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 IGKV1D-13A0A0B4J2D9 117 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 IGKV1-13P0DP09 117 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 SUMO2P61956 95 aaKnown RBP20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 SSBP4Q9BWG4 385 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 FOXC2Q99958 501 aa20.14■□□□□ 0.81
RAPGEF1-203ENST00000372195 PRR32B1ATL7 298 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 PDLIM4P50479 330 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 GLMPQ8WWB7 406 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 PATJQ8NI35 1801 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 IGHV2OR16-5A0A0B4J2B6 119 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 PMCHL2Q9BQD1 86 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 TYMSP04818 313 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 APOBEC3AP31941 199 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 SOX21Q9Y651 276 aaPredicted RBP20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 IFNL4K9M1U5 179 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 LINC00114Q6XXX2 140 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 MRAP2Q96G30 205 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 CEACAM4O75871 244 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 SNRPD3P62318 126 aaKnown RBP20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 C18orf12Q96KH6 178 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 RNF126Q9BV68 326 aa20.13■□□□□ 0.81
RAPGEF1-203ENST00000372195 ADMP35318 185 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 C1QTNF9BB2RNN3 333 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 CIRBPQ14011 172 aaKnown RBP20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 PLXNA1Q9UIW2 1896 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 PEF1Q9UBV8 284 aaKnown RBP20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 A0A1B0GTI1 187 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 B9A039 149 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 C1QTNF5Q9BXJ0 243 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 A0A1W2PRX2 142 aa20.12■□□□□ 0.81
RAPGEF1-203ENST00000372195 CHD5Q8TDI0 1954 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 IGFBP3P17936 291 aaPredicted RBP20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 ZCCHC24Q8N2G6 241 aaKnown RBP20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 OR52E5Q8NH55 327 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 IGKV3D-20A0A0C4DH25 116 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 CCL3L1P16619 93 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 ZNF525Q8N782 197 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 Q9H3A6 140 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 TNS1Q9HBL0 1735 aaKnown RBP20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 PSME4Q14997 1843 aa20.11■□□□□ 0.81
RAPGEF1-203ENST00000372195 ITLN2Q8WWU7 325 aaPredicted RBP20.1■□□□□ 0.81
RAPGEF1-203ENST00000372195 IGHV3-11P01762 117 aa20.1■□□□□ 0.81
RAPGEF1-203ENST00000372195 FADS6Q8N9I5 356 aa20.1■□□□□ 0.81
RAPGEF1-203ENST00000372195 FAM71F2Q6NXP2 309 aa20.1■□□□□ 0.81
RAPGEF1-203ENST00000372195 VENTXO95231 258 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms